RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZNF234Q14588 700 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 GEN1Q17RS7 908 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 FUT11Q495W5 492 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 KIAA1211LQ6NV74 962 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 IL27RAQ6UWB1 636 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 SERPINA13PQ6UXR4 307 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 TMPRSS6Q8IU80 811 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 TRIM59Q8IWR1 403 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP50-217ENST00000491860 RBBP8NLQ8NC74 664 aaPredicted RBP9.12□□□□□ -0.95
NUP50-217ENST00000491860 EHBP1Q8NDI1 1231 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 UBA3Q8TBC4 463 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 STK32AQ8WU08 396 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 NELFBQ8WX92 580 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 HSPA12BQ96MM6 686 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 ACOX2Q99424 681 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 ITM2CQ9NQX7 267 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 TMEM74BQ9NUR3 256 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 WSB2Q9NYS7 404 aaPredicted RBP9.12□□□□□ -0.95
NUP50-217ENST00000491860 SCML1Q9UN30 329 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP50-217ENST00000491860 RAD54BQ9Y620 910 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 NBEAQ8NFP9 2946 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 IGF2RP11717 2491 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 PKD1L2Q7Z442 2459 aa9.12□□□□□ -0.95
NUP50-217ENST00000491860 FASNP49327 2511 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 AKAP13Q12802 2813 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 A0A1B0GTW7 788 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 ANTXRLA6NF34 631 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TULP2O00295 520 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 GIPC1O14908 333 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 MOCS3O95396 460 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 ASLP04424 464 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 EPHX1P07099 455 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 C7P10643 843 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 POLR2EP19388 210 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 HOXD9P28356 352 aaPredicted RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 MAPK8P45983 427 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TBX4P57082 545 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 ST8SIA6P61647 398 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 SEMA3BQ13214 749 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 PLEKHG6Q3KR16 790 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TTC31Q49AM3 519 aaPredicted RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 FNDC3BQ53EP0 1204 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 KLHL10Q6JEL2 608 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 FRMD1Q8N878 549 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 KDM1BQ8NB78 822 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 HJURPQ8NCD3 748 aaPredicted RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 OR2T3Q8NH03 318 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 DNASE2BQ8WZ79 361 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 EDEM1Q92611 657 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TOE1Q96GM8 510 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 MED15Q96RN5 788 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 PPP1R9BQ96SB3 815 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 SLC12A6Q9UHW9 1150 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 GGA2Q9UJY4 613 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
NUP50-217ENST00000491860 CNTN6Q9UQ52 1028 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 CTNND2Q9UQB3 1225 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 TLR6Q9Y2C9 796 aa9.11□□□□□ -0.95
NUP50-217ENST00000491860 DSPP15924 2871 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 ATXN2Q99700 1313 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 WASH3PC4AMC7 463 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 CAPN9O14815 690 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 ACSL4O60488 711 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 RNASEH1O60930 286 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 CER1O95813 267 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 IGLV3-27P01718 113 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 DNTTP04053 509 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 DLDP09622 509 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 ZNF883P0CG24 379 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 SLC2A3P11169 496 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 PABPC1P11940 636 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 TPMTP51580 245 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 OXCT1P55809 520 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 FOXC1Q12948 553 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 CAMK2GQ13555 558 aaPredicted RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 ZNF423Q2M1K9 1284 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 PIK3R6Q5UE93 754 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 TTC39BQ5VTQ0 682 aaPredicted RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 PMF1Q6P1K2 205 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 KIAA0907Q7Z7F0 614 aaPredicted RBP9.1□□□□□ -0.95
NUP50-217ENST00000491860 PIP4P1Q86T03 277 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 SLC41A1Q8IVJ1 513 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 MFN1Q8IWA4 741 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 MINDY1Q8N5J2 469 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 DEFB124Q8NES8 71 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 LMO3Q8TAP4 145 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 NOX5Q96PH1 765 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 SCNM1Q9BWG6 230 aa9.1□□□□□ -0.95
NUP50-217ENST00000491860 GTPBP2Q9BX10 602 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms