RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 EDEM1Q92611 657 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 MYLPFQ96A32 169 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 NSL1Q96IY1 281 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 QKIQ96PU8 341 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■■■■□ 26.5
NPHP3-208ENST00000490993 HMX1Q9NP08 348 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SNX3O60493 162 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SMIM24O75264 130 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 GCATO75600 419 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 DNAJC8O75937 253 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 JCHAINP01591 159 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PSEN1P49768 467 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SLC25A11Q02978 314 aaKnown RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SOWAHAQ2M3V2 549 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 RABGAP1LQ5R372 815 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 GPATCH11Q8N954 259 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 OR6P1Q8NGX9 317 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 USP6NLQ92738 828 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PABPC5Q96DU9 382 aaKnown RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 CSPG4P5Q96PW8 444 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 EBNA1BP2Q99848 306 aaKnown RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 TACO1Q9BSH4 297 aaKnown RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 C10orf88Q9H8K7 445 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 OR12D3Q9UGF7 316 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PRDM4Q9UKN5 801 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 ADAM28Q9UKQ2 775 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SCN9AQ15858 1988 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 WDR27A2RRH5 827 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 C5orf60A6NFR6 353 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PAPSS1O43252 624 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 TBX4P57082 545 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 CACNB2Q08289 660 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 FAAP100Q0VG06 881 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PDK4Q16654 411 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 EMC10Q5UCC4 262 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 RNF43Q68DV7 783 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 KCTD13Q8WZ19 329 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF75CPQ92670 426 aaPredicted RBP7.55□□□□□ -1.2
NPHP3-208ENST00000490993 ACBD6Q9BR61 282 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 SPON2Q9BUD6 331 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 Q9H521 79 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 PRKAG2Q9UGJ0 569 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 ANKRD6Q9Y2G4 727 aa7.55□□□□□ -1.2
NPHP3-208ENST00000490993 F5H5T6 163 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CA12O43570 354 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 DIAPH2O60879 1101 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 GOT1P17174 413 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CCND1P24385 295 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CD52P31358 61 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 FLT3LGP49771 235 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CDK7P50613 346 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 SMARCB1Q12824 385 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 KLF1Q13351 362 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ART3Q13508 389 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 MAPRE2Q15555 327 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 KBTBD12Q3ZCT8 623 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 NOMO2Q5JPE7 1267 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 PDPK2PQ6A1A2 396 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 PRUNE1Q86TP1 453 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CPNE8Q86YQ8 564 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ELMO2Q96JJ3 720 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 TASP1Q9H6P5 420 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 LSM7Q9UK45 103 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 SLC8A2Q9UPR5 921 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 H0YGN5 161 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ADCY6O43306 1168 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 NQO1P15559 274 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 MGAT1P26572 445 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 YWHAQP27348 245 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ETFBP38117 255 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ALDH1A3P47895 512 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 RENBPP51606 427 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 DPYSL2Q16555 572 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 FASTKD1Q53R41 847 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 HASPINQ8TF76 798 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 CCDC126Q96EE4 140 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 SRPK1Q96SB4 655 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 IL22Q9GZX6 179 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 VPS9D1Q9Y2B5 631 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 NFS1Q9Y697 457 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 LTBP1Q14766 1721 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 DCDC2CA8MYV0 355 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 PRKAR2AP13861 404 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ADRA1BP35368 520 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 MYH11P35749 1972 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 STRA8Q7Z7C7 330 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 SLC35F5Q8WV83 523 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 TWNKQ96RR1 684 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 B3GNT5Q9BYG0 378 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 GGT7Q9UJ14 662 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 TTLL13PA6NNM8 815 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms