RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	GTPBP3	Q969Y2	492 aa	Known RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	SYAP1	Q96A49	352 aa	Predicted RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	ZNF689	Q96CS4	500 aa	Predicted RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	SNX27	Q96L92	541 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	ZNF558	Q96NG5	402 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	FCRL3	Q96P31	734 aa	Predicted RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	GSDMA	Q96QA5	445 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	TSPAN18	Q96SJ8	248 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	GAD1	Q99259	594 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	MSTO1	Q9BUK6	570 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	FGFBP2	Q9BYJ0	223 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	STK33	Q9BYT3	514 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	UNK	Q9C0B0	810 aa	Known RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	RC3H2	Q9HBD1	1191 aa	Known RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	CD248	Q9HCU0	757 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	SLC39A2	Q9NP94	309 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	PLSCR4	Q9NRQ2	329 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	SLC38A7	Q9NVC3	462 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	LRFN1	Q9P244	771 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	AASS	Q9UDR5	926 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	SLC13A4	Q9UKG4	626 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	YBX2	Q9Y2T7	364 aa	Known RBP	4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	HES2	Q9Y543	173 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	B3GALT1	Q9Y5Z6	326 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	PTPRS	Q13332	1948 aa		4.65	□□□□□ -1.67
SFPQ-210	ENST00000490668	RALGAPA2	Q2PPJ7	1873 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	MYH11	P35749	1972 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668		A0A1W2PPH5	198 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ARL5C	A6NH57	179 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	MASP2	O00187	686 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ABLIM1	O14639	778 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	OGT	O15294	1046 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	INPPL1	O15357	1258 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ARHGAP6	O43182	974 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CALU	O43852	315 aa	Predicted RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	KLRC4	O43908	158 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	LRIG2	O94898	1065 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	IL18RAP	O95256	599 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	PRAMEF1	O95521	474 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	DNTT	P04053	509 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	LPL	P06858	475 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CLTA	P09496	248 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CXCL8	P10145	99 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	RAC2	P15153	192 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	KRT15	P19012	456 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	EEF1G	P26641	437 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	STAT1	P42224	750 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ALDH7A1	P49419	539 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	GATM	P50440	423 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	SCNN1G	P51170	649 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	SLC5A3	P53794	718 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	SLC16A1	P53985	500 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	FAM189B	P81408	668 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	FMO1	Q01740	532 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	DSC2	Q02487	901 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TAP1	Q03518	808 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	WASHC5	Q12768	1159 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	STK4	Q13043	487 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	DUSP4	Q13115	394 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	KNOP1	Q1ED39	458 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	GLRA4	Q5JXX5	417 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	LIN54	Q6MZP7	749 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	PLBD1	Q6P4A8	553 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CRTC3	Q6UUV7	619 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TRIM67	Q6ZTA4	783 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	MRPL10	Q7Z7H8	261 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	USP37	Q86T82	979 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CDH24	Q86UP0	819 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	MOGAT3	Q86VF5	341 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CD302	Q8IX05	232 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CRIPAK	Q8N1N5	446 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	GPD1L	Q8N335	351 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TRIML1	Q8N9V2	468 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	MFSD2A	Q8NA29	543 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	COLGALT1	Q8NBJ5	622 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	SH3RF2	Q8TEC5	729 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	SCFD1	Q8WVM8	642 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ARNTL2	Q8WYA1	636 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	HTRA1	Q92743	480 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	DLG3	Q92796	817 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	C16orf92	Q96LL3	132 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	ZFP42	Q96MM3	310 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	KCNJ15	Q99712	375 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TSG101	Q99816	390 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TMEM175	Q9BSA9	504 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	STRA6	Q9BX79	667 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	PLVAP	Q9BX97	442 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CLSTN2	Q9H4D0	955 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	PCIF1	Q9H4Z3	704 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	RPF1	Q9H9Y2	349 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	AGPAT3	Q9NRZ7	376 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	CHST7	Q9NS84	486 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	RAD18	Q9NS91	495 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	OLA1	Q9NTK5	396 aa	Known RBP	4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	TBC1D13	Q9NVG8	400 aa		4.64	□□□□□ -1.67
SFPQ-210	ENST00000490668	NSMCE4A	Q9NXX6	385 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms