RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 FUOMA2VDF0 154 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 PPEF2O14830 753 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 ACSL3O95573 720 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 APOEP02649 317 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 CYP1A2P05177 515 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 RPL34P49207 117 aaKnown RBP10.13□□□□□ -0.79
NOD1-208ENST00000489614 ENTPD1P49961 510 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 ARHGAP44Q17R89 818 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 PPM1KQ8N3J5 372 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 SLC25A41Q8N5S1 370 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 EIF1ADQ8N9N8 165 aaKnown RBP10.13□□□□□ -0.79
NOD1-208ENST00000489614 IRGQQ8WZA9 623 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 CCDC68Q9H2F9 335 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 ACP6Q9NPH0 428 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 ZFP69BQ9UJL9 534 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 HES2Q9Y543 173 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 PCDHB2Q9Y5E7 798 aa10.13□□□□□ -0.79
NOD1-208ENST00000489614 OBSL1O75147 1896 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 MYOCOSA0A1B0GUC4 107 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 A6NL46 340 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 C9IYK1 514 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 TRMUO75648 421 aaKnown RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 FBXO21O94952 628 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 CLPTM1O96005 669 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 ITGB3P05106 788 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 NUDT17P0C025 328 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 TCEA1P23193 301 aaKnown RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 OSTNP61366 133 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 PKDCCQ504Y2 493 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 DEPDC1Q5TB30 811 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 VSTM1Q6UX27 236 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 DDHD1Q8NEL9 900 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 STARD8Q92502 1023 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 TOX2Q96NM4 488 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 DCTN4Q9UJW0 460 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 GSC2O15499 205 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 KDM1AO60341 852 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 NBNO60934 754 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 EFEMP2O95967 443 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 CFHP08603 1231 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 SLC5A2P31639 672 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 THPOP40225 353 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 CPA2P48052 419 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 DLG1Q12959 904 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 SEPT6Q14141 434 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 PLEKHG4Q58EX7 1191 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 ALKBH5Q6P6C2 394 aaKnown RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 FBXO46Q6PJ61 603 aaPredicted RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 MON1BQ7L1V2 547 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 GLYCTKQ8IVS8 523 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 WDTC1Q8N5D0 677 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 CFAP61Q8NHU2 1237 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 KBTBD7Q8WVZ9 684 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 STMN4Q9H169 189 aaPredicted RBP10.12□□□□□ -0.79
NOD1-208ENST00000489614 STARD7Q9NQZ5 370 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 CISHQ9NSE2 258 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.12□□□□□ -0.79
NOD1-208ENST00000489614 GBF1Q92538 1859 aa10.12□□□□□ -0.79
NOD1-208ENST00000489614 SH3PXD2BA1X283 911 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 NOTOA8MTQ0 251 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 H3BSA7 217 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 CBFA2T3O75081 653 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 TMEM191BP0C7N4 346 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 TAC1P20366 129 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 CD52P31358 61 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 NOMO3P69849 1222 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 ATP1A4Q13733 1029 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 ZNF699Q32M78 642 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 RAPH1Q70E73 1250 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 C11orf74Q86VG3 221 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 PHF13Q86YI8 300 aaPredicted RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 SLC4A11Q8NBS3 891 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 ACTRT1Q8TDG2 376 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 FAM161BQ96MY7 647 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 SMYD3Q9H7B4 428 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 UBN1Q9NPG3 1134 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 NDE1Q9NXR1 346 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 UBQLN1Q9UMX0 589 aaKnown RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 COG5Q9UP83 839 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 OCM2P0CE71 109 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 OCMP0CE72 109 aaPredicted RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 ANPEPP15144 967 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 POLR2BP30876 1174 aaKnown RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 YARSP54577 528 aaKnown RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 GALCP54803 685 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 PSMC1P62191 440 aaKnown RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 RBP5P82980 135 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 TFAMQ00059 246 aaKnown RBP10.11□□□□□ -0.79
NOD1-208ENST00000489614 ITGA9Q13797 1035 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 MMEL1Q495T6 779 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 ACAD10Q6JQN1 1059 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 SLC39A5Q6ZMH5 540 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 C3orf62Q6ZUJ4 267 aa10.11□□□□□ -0.79
NOD1-208ENST00000489614 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms