RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 XAB2Q9HCS7 855 aaKnown RBP6.59□□□□□ -1.35
SF3A3-208ENST00000489537 TRMT13Q9NUP7 481 aaKnown RBP6.59□□□□□ -1.35
SF3A3-208ENST00000489537 PCSK1NQ9UHG2 260 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 FAM153AQ9UHL3 310 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 SLC24A2Q9UI40 661 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 DNPEPQ9ULA0 475 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 ATP11BQ9Y2G3 1177 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 IKBKGQ9Y6K9 419 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 ANK1P16157 1881 aa6.59□□□□□ -1.35
SF3A3-208ENST00000489537 CLUHO75153 1309 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TCRBV7S2A1N4TA0A589 114 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 C5orf60A6NFR6 353 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ZSCAN5CA6NGD5 496 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CASTOR2A6NHX0 329 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PI4K2BG5E9Z4 385 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 H3BQF6 201 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TRDMT1O14717 391 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ALOX15BO15296 676 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 OPHN1O60890 802 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SHOX2O60902 331 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 GCATO75600 419 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 FGFR1P11362 822 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 MLNP12872 115 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 KRT10P13645 584 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CYP2F1P24903 491 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 LMO2P25791 158 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 IVDP26440 423 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 L1CAMP32004 1257 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 MAGEA4P43358 317 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 LMAN1P49257 510 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SLC18A1P54219 525 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 HDAC4P56524 1084 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DAOAP59103 153 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PPP2R2AP63151 447 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ATP11AP98196 1134 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CREMQ03060 361 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ZNF844Q08AG5 666 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ORC1Q13415 861 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SLC29A2Q14542 456 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SMTNL2Q2TAL5 461 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 LRIT3Q3SXY7 679 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TIGD5Q53EQ6 642 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PLEKHG4Q58EX7 1191 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SLC45A4Q5BKX6 768 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 RNASEH2BQ5TBB1 312 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 BTBD8Q5XKL5 378 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 HEATR6Q6AI08 1181 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ITPRIPL1Q6GPH6 555 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ZNF449Q6P9G9 518 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 FOXR1Q6PIV2 292 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ANKS3Q6ZW76 656 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CYS1Q717R9 158 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 B4GALNT4Q76KP1 1039 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 C16orf59Q7L2K0 433 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ANKRD33Q7Z3H0 272 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PHLDB2Q86SQ0 1253 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 MON1AQ86VX9 555 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC25Q86WR0 208 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DDX42Q86XP3 938 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 GSPT2Q8IYD1 628 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DEFB106AQ8N104 65 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 VPS52Q8N1B4 723 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 LRRC43Q8N309 656 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DEFB123Q8N688 67 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ARFGAP1Q8N6T3 406 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PLD5Q8N7P1 536 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 MCUQ8NE86 351 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PDZD8Q8NEN9 1154 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SPPL2BQ8TCT7 592 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PYROXD1Q8WU10 500 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TFB1MQ8WVM0 346 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ATG4AQ8WYN0 398 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ALKBH8Q96BT7 664 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PCED1BQ96HM7 432 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 C8orf48Q96LL4 319 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SERPINB11Q96P15 392 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 HAPLN3Q96S86 360 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PLCD4Q9BRC7 762 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SNRNP25Q9BV90 132 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 B3GNT5Q9BYG0 378 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 OSBPL2Q9H1P3 480 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CENPHQ9H3R5 247 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DPEP3Q9H4B8 488 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 DHX35Q9H5Z1 703 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 WDCPQ9H6R7 721 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CATSPERBQ9H7T0 1116 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 NRDE2Q9H7Z3 1164 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 GOLGA2P5Q9HBQ8 144 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 EIF2B3Q9NR50 452 aaKnown RBP6.58□□□□□ -1.36
SF3A3-208ENST00000489537 CALCOCO1Q9P1Z2 691 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 ADAM28Q9UKQ2 775 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 TRHDEQ9UKU6 1024 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 FZD10Q9ULW2 581 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 SSX2IPQ9Y2D8 614 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 NFS1Q9Y697 457 aa6.58□□□□□ -1.36
SF3A3-208ENST00000489537 USP3Q9Y6I4 520 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms