RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 BTN2A3PQ96KV6 586 aa21.59■■□□□ 1.05
SND1-214ENST00000489417 RNF38Q9H0F5 515 aa21.59■■□□□ 1.05
SND1-214ENST00000489417 HCFC1R1Q9NWW0 138 aa21.59■■□□□ 1.05
SND1-214ENST00000489417 HS3ST4Q9Y661 456 aa21.59■■□□□ 1.05
SND1-214ENST00000489417 CHD9Q3L8U1 2897 aa21.59■■□□□ 1.05
SND1-214ENST00000489417 TARSL2A2RTX5 802 aaKnown RBP21.58■■□□□ 1.05
SND1-214ENST00000489417 SPDYE4A6NLX3 237 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 LRIG2O94898 1065 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 OLFM2O95897 454 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 HTR7P34969 479 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 PTGIRP43119 386 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 KCNJ1P48048 391 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 NRG1Q02297 640 aaPredicted RBP21.58■■□□□ 1.05
SND1-214ENST00000489417 MTA1Q13330 715 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 NOMO1Q15155 1222 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 TXNDC8Q6A555 127 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 C1orf228Q6PIY5 440 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 NPNTQ6UXI9 565 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 P3H4Q92791 437 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 C1orf74Q96LT6 269 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 CDCA3Q99618 268 aaPredicted RBP21.58■■□□□ 1.05
SND1-214ENST00000489417 KLF16Q9BXK1 252 aaPredicted RBP21.58■■□□□ 1.05
SND1-214ENST00000489417 PRKD2Q9BZL6 878 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 ATXN3LQ9H3M9 355 aa21.58■■□□□ 1.05
SND1-214ENST00000489417 SAE1Q9UBE0 346 aaPredicted RBP21.58■■□□□ 1.05
SND1-214ENST00000489417 OBSL1O75147 1896 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 A0A1W2PRU2 124 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 FAM187AA6NFU0 413 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 TTI1O43156 1089 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 MBL2P11226 248 aaPredicted RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 KCNQ1P51787 676 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 VCPP55072 806 aaKnown RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 MLLT6P55198 1093 aaPredicted RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 SLC7A5Q01650 507 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 PIK3R6Q5UE93 754 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 MANEALQ5VSG8 457 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 NCBP2-AS2Q69YL0 99 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 LEMD2Q8NC56 503 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 SLC35B2Q8TB61 432 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 GRK7Q8WTQ7 553 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 NKD2Q969F2 451 aaPredicted RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 PPP2R3CQ969Q6 453 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 ETNK2Q9NVF9 386 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 STIM2Q9P246 746 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 DNMT3BQ9UBC3 853 aaKnown RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 DMGDHQ9UI17 866 aaKnown RBP21.57■■□□□ 1.04
SND1-214ENST00000489417 DNPEPQ9ULA0 475 aa21.57■■□□□ 1.04
SND1-214ENST00000489417 DCLK1O15075 740 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 HEXIM1O94992 359 aaKnown RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 ECEL1O95672 775 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 ERCC2P18074 760 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 BYSLQ13895 437 aaKnown RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 ACBD5Q5T8D3 534 aaPredicted RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 PDZD4Q76G19 769 aaPredicted RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 ARL14EPQ8N8R7 260 aaPredicted RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 ATL2Q8NHH9 583 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 SLCO2A1Q92959 643 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 ZNF707Q96C28 371 aaPredicted RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 TBC1D31Q96DN5 1066 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 CCDC114Q96M63 670 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 SLC22A12Q96S37 553 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 FEZ2Q9UHY8 353 aaPredicted RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 DRG1Q9Y295 367 aaKnown RBP21.56■■□□□ 1.04
SND1-214ENST00000489417 MFHAS1Q9Y4C4 1052 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 HEY1Q9Y5J3 304 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 ANAPC1Q9H1A4 1944 aa21.56■■□□□ 1.04
SND1-214ENST00000489417 CCDC195A0A1B0GUA6 201 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 E9PAM4 449 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 MCF2LO15068 1137 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 STC2O76061 302 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 RHOP08100 348 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 SRGAP2BP0DMP2 458 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 GJA1P17302 382 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 PFKLP17858 780 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 HDCP19113 662 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 EPHB2P29323 1055 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 HOXC13P31276 330 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 HARS2P49590 506 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 EIF3EP60228 445 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 RBM10P98175 930 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 PAFAH1B3Q15102 231 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 OASLQ15646 514 aaKnown RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 MS4A13Q5J8X5 152 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 C14orf80Q86SX3 495 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 JAMLQ86YT9 394 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 SHKBP1Q8TBC3 707 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 RUBCNQ92622 972 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 CYP2S1Q96SQ9 504 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 PNKPQ96T60 521 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 PARD6BQ9BYG5 372 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 GKN1Q9NS71 199 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 NEU3Q9UQ49 428 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 CLUHO75153 1309 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 TRAV19A0A0A6YYK7 116 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 NRG2O14511 850 aaPredicted RBP21.55■■□□□ 1.04
SND1-214ENST00000489417 ACSL4O60488 711 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 CCR2P41597 374 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 NR2C2P49116 596 aa21.55■■□□□ 1.04
SND1-214ENST00000489417 LMNB2Q03252 620 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms