RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 RASGEF1CQ8N431 466 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 NECTIN4Q96NY8 510 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 NAP1L3Q99457 506 aaPredicted RBP18.85■□□□□ 0.61
C9orf16-203ENST00000489240 EPAS1Q99814 870 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 ZNF670Q9BS34 389 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 MTMR10Q9NXD2 777 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 GDE1Q9NZC3 331 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 EFR3BQ9Y2G0 817 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 ZNF510Q9Y2H8 683 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 SH3BP1Q9Y3L3 701 aa18.85■□□□□ 0.61
C9orf16-203ENST00000489240 I6L893 689 aaPredicted RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 ZNF185O15231 689 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 TCF3P15923 654 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 PAFAH1B1P43034 410 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 HCAR3P49019 387 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 SEMA3BQ13214 749 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 CBX2Q14781 532 aaPredicted RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 TAZQ16635 292 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 HTR3DQ70Z44 454 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 GET4Q7L5D6 327 aaPredicted RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 NPAS3Q8IXF0 933 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 SMRP1Q8NCR6 262 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 ZSCAN18Q8TBC5 510 aaPredicted RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 ACTRT1Q8TDG2 376 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 TSC1Q92574 1164 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 FGF13Q92913 245 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 DDX50Q9BQ39 737 aaKnown RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 MAK16Q9BXY0 300 aaKnown RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 PRDM16Q9HAZ2 1276 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 CFAP97Q9P2B7 532 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 TTC7AQ9ULT0 858 aaPredicted RBP18.84■□□□□ 0.61
C9orf16-203ENST00000489240 HS3ST4Q9Y661 456 aa18.84■□□□□ 0.61
C9orf16-203ENST00000489240 DOCK8Q8NF50 2099 aa18.83■□□□□ 0.61
C9orf16-203ENST00000489240 hCG_1818297A0A087WSY0 165 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 PGRMC1O00264 195 aaKnown RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 LEFTY2O00292 366 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CREB3O43889 395 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CD48P09326 243 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 TPI1P60174 286 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CCDC85BQ15834 202 aaPredicted RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 WHAMMP3Q1A5X7 153 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 MS4A13Q5J8X5 152 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 PIK3R6Q5UE93 754 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 AADACL2Q6P093 401 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 LRRC31Q6UY01 552 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CREG2Q8IUH2 290 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 DENND1CQ8IV53 801 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 ARID3BQ8IVW6 561 aaPredicted RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 ADAMTS19Q8TE59 1207 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 SH3RF2Q8TEC5 729 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 MAIP1Q8WWC4 291 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 USP13Q92995 863 aaPredicted RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CAPZA3Q96KX2 299 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 ZSWIM3Q96MP5 696 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 GUCD1Q96NT3 240 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 MAGEB5Q9BZ81 275 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 OSBPL8Q9BZF1 889 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 RRAGDQ9NQL2 400 aaPredicted RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CWC15Q9P013 229 aaKnown RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 STIM2Q9P246 746 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CDH22Q9UJ99 828 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 AGO1Q9UL18 857 aaKnown RBP18.83■□□□□ 0.6
C9orf16-203ENST00000489240 CDH7Q9ULB5 785 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 MRFAP1Q9Y605 127 aa18.83■□□□□ 0.6
C9orf16-203ENST00000489240 E2F8A0AVK6 867 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 DAPK3O43293 454 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 TJP3O95049 919 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 FGGP02679 453 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 KLKB1P03952 638 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 ZXDBP98169 803 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 CKAP4Q07065 602 aaKnown RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 TFDP2Q14188 446 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 SKIV2LQ15477 1246 aaKnown RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 LONRF2Q1L5Z9 754 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 ANKRD20A8PQ5CZ79 823 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 ADGRF1Q5T601 910 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 CHSY1Q86X52 802 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 SLC13A5Q86YT5 568 aaPredicted RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 RFX6Q8HWS3 928 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 CELF5Q8N6W0 485 aaKnown RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 WBP2Q969T9 261 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 FAF2Q96CS3 445 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 MS4A14Q96JA4 679 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 CSPG4P5Q96PW8 444 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 RNF157Q96PX1 679 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 SMG9Q9H0W8 520 aaKnown RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 UBE2ZQ9H832 354 aaPredicted RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 XPO7Q9UIA9 1087 aaKnown RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 STOML2Q9UJZ1 356 aa18.82■□□□□ 0.6
C9orf16-203ENST00000489240 ZFP37Q9Y6Q3 630 aaPredicted RBP18.82■□□□□ 0.6
C9orf16-203ENST00000489240 LAMA3Q16787 3333 aa18.81■□□□□ 0.6
C9orf16-203ENST00000489240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.81■□□□□ 0.6
C9orf16-203ENST00000489240 E9PAM4 449 aa18.81■□□□□ 0.6
C9orf16-203ENST00000489240 FAM72CH0Y354 149 aa18.81■□□□□ 0.6
C9orf16-203ENST00000489240 PRAMEF12O95522 483 aa18.81■□□□□ 0.6
C9orf16-203ENST00000489240 KRT10P13645 584 aa18.81■□□□□ 0.6
C9orf16-203ENST00000489240 GOT1P17174 413 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms