RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF366Q8N895 744 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 STK32AQ8WU08 396 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 UCMAQ8WVF2 138 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 MRGPRX1Q96LB2 322 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 FAM81BQ96LP2 452 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 GBP4Q96PP9 640 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 LSM14BQ9BX40 385 aaKnown RBP14.57□□□□□ -0.08
VTI1A-206ENST00000489142 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
VTI1A-206ENST00000489142 COX16Q9P0S2 106 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 NFE2L3Q9Y4A8 694 aa14.57□□□□□ -0.08
VTI1A-206ENST00000489142 IGHV1OR15-9A0A0B4J2B8 117 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 LNP1A1A4G5 178 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 ZBTB24O43167 697 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 SART1O43290 800 aaKnown RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 LATS1O95835 1130 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 ERBB2P04626 1255 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 CD70P32970 193 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 NUMBP49757 651 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 KLK7P49862 253 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 RPS24P62847 133 aaKnown RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 ARID5AQ03989 594 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 PTK2Q05397 1052 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 RING1Q06587 406 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 STARD3Q14849 445 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 DRAP1Q14919 205 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 MEA1Q16626 185 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 ZC3H12AQ5D1E8 599 aaKnown RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 SERPINA13PQ6UXR4 307 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 C11orf57Q6ZUT1 292 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 FAM183BPQ6ZVS7 135 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 CHST9Q7L1S5 443 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 CFAP52Q8N1V2 620 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 PPP1R13BQ96KQ4 1090 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 SERPINB11Q96P15 392 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 EDEM2Q9BV94 578 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 SLC2A11Q9BYW1 496 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 MKRN2Q9H000 416 aaKnown RBP14.56□□□□□ -0.08
VTI1A-206ENST00000489142 POPDC2Q9HBU9 364 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 FSCN3Q9NQT6 498 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 TMEM74BQ9NUR3 256 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 GGA2Q9UJY4 613 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 TLR6Q9Y2C9 796 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 PI4KAP42356 2102 aa14.56□□□□□ -0.08
VTI1A-206ENST00000489142 TRUB2O95900 331 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 EPHX1P07099 455 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 PABPC1P11940 636 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 ITPKAP23677 461 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 KRT9P35527 623 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 YWHAZP63104 245 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 FOXK2Q01167 660 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 BYSLQ13895 437 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 FNDC3BQ53EP0 1204 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 DCAF6Q58WW2 860 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 KLHDC7AQ5VTJ3 777 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 TAF3Q5VWG9 929 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 LYSMD4Q5XG99 296 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 RAP1GAP2Q684P5 730 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 RNF43Q68DV7 783 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 IL31Q6EBC2 164 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 OR6B2Q6IFH4 312 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 MMS22LQ6ZRQ5 1243 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 ADIPOR2Q86V24 386 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 MFN1Q8IWA4 741 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 FAM71AQ8IYT1 594 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 LGI2Q8N0V4 545 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 DEFB106AQ8N104 65 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 SLC39A13Q96H72 371 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 VPS16Q9H269 839 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 FAM204AQ9H8W3 233 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 PCDHGC3Q9UN70 934 aa14.55□□□□□ -0.08
VTI1A-206ENST00000489142 NYNRINQ9P2P1 1898 aaKnown RBP14.55□□□□□ -0.08
VTI1A-206ENST00000489142 KHNYNO15037 678 aaKnown RBP14.54□□□□□ -0.08
VTI1A-206ENST00000489142 IRAK2O43187 625 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 SYNCRIPO60506 623 aaKnown RBP14.54□□□□□ -0.08
VTI1A-206ENST00000489142 FOXD2O60548 495 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-206ENST00000489142 ZNF445P59923 1031 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 IRX4P78413 519 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 ENPP2Q13822 863 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 EIF4HQ15056 248 aaKnown RBP14.54□□□□□ -0.08
VTI1A-206ENST00000489142 KRT31Q15323 416 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 PTPRNQ16849 979 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 PTPN20Q4JDL3 420 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 MBLAC2Q68D91 279 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 CHSY1Q86X52 802 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 SLC41A1Q8IVJ1 513 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 CARNMT1Q8N4J0 409 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 HJURPQ8NCD3 748 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-206ENST00000489142 MTG2Q9H4K7 406 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 PRDM16Q9HAZ2 1276 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 NCOR2Q9Y618 2525 aa14.54□□□□□ -0.08
VTI1A-206ENST00000489142 C4orf47A7E2U8 309 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 AP5Z1O43299 807 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 IGLV3-25P01717 112 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 APOEP02649 317 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 UCHL3P15374 230 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 TACR2P21452 398 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms