RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 AHI1Q8N157 1196 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 SORCS1Q8WY21 1168 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
SRRM1-216ENST00000489130 MKRN2Q9H000 416 aaKnown RBP13.05□□□□□ -0.32
SRRM1-216ENST00000489130 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 CD93Q9NPY3 652 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 USP36Q9P275 1121 aaKnown RBP13.05□□□□□ -0.32
SRRM1-216ENST00000489130 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 AJAP1Q9UKB5 411 aaPredicted RBP13.05□□□□□ -0.32
SRRM1-216ENST00000489130 PCDHGC3Q9UN70 934 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
SRRM1-216ENST00000489130 LAMA1P25391 3075 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 GOLGA6L7A0A1B0GV03 622 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 CAPN9O14815 690 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 SYNCRIPO60506 623 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TBL1XO60907 577 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 IGLV3-25P01717 112 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 C7P10643 843 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ITPKAP23677 461 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 USP8P40818 1118 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 COPAP53621 1224 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 YWHAZP63104 245 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 IRX4P78413 519 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ARID5AQ03989 594 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ZNF33AQ06730 810 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 LMAN2Q12907 356 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TRIM61Q5EBN2 209 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 SLC23A3Q6PIS1 610 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 SERPINA13PQ6UXR4 307 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TMPRSS6Q8IU80 811 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 WDTC1Q8N5D0 677 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 HJURPQ8NCD3 748 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 PRICKLE1Q96MT3 831 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TUBGCP2Q9BSJ2 902 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 LHX5Q9H2C1 402 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 POPDC2Q9HBU9 364 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TMEM9BQ9NQ34 198 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 TJP2Q9UDY2 1190 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 DNAJC12Q9UKB3 198 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 NUP205Q92621 2012 aa13.04□□□□□ -0.32
SRRM1-216ENST00000489130 ATXN2Q99700 1313 aaKnown RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-216ENST00000489130 C4orf47A7E2U8 309 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CDX4O14627 284 aaPredicted RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 IGLV3-19P01714 112 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 EPHX1P07099 455 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 GLI1P08151 1106 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CD6P30203 668 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 PTK2Q05397 1052 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CAMK2GQ13555 558 aaPredicted RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 PTPRNQ16849 979 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 SLC41A1Q8IVJ1 513 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 MFN1Q8IWA4 741 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 FIBINQ8TAL6 211 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CYB5D2Q8WUJ1 264 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 ZNF419Q96HQ0 510 aaPredicted RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 PPP1R13BQ96KQ4 1090 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
SRRM1-216ENST00000489130 ITM2CQ9NQX7 267 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
SRRM1-216ENST00000489130 TYW5A2RUC4 315 aaKnown RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 FOXN3O00409 490 aaPredicted RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 APOEP02649 317 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 HLA-EP13747 358 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 CD70P32970 193 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 CLCN1P35523 988 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 TPMTP51580 245 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 RPS24P62847 133 aaKnown RBP13.02□□□□□ -0.33
SRRM1-216ENST00000489130 KCNMA1Q12791 1236 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 TAF5Q15542 800 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 DUOXA1Q1HG43 343 aa13.02□□□□□ -0.33
SRRM1-216ENST00000489130 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms