RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 DENND5BQ6ZUT9 1274 aa20.89■□□□□ 0.94
NECAB3-213ENST00000488489 TRMT10CQ7L0Y3 403 aaKnown RBP20.89■□□□□ 0.94
NECAB3-213ENST00000488489 TP53INP2Q8IXH6 220 aa20.89■□□□□ 0.94
NECAB3-213ENST00000488489 RNF34Q969K3 372 aa20.89■□□□□ 0.94
NECAB3-213ENST00000488489 RBM15Q96T37 977 aaKnown RBP eCLIP20.89■□□□□ 0.94
NECAB3-213ENST00000488489 GMIPQ9P107 970 aa20.89■□□□□ 0.94
NECAB3-213ENST00000488489 NR2E3Q9Y5X4 410 aa20.89■□□□□ 0.94
NECAB3-213ENST00000488489 GREB1Q4ZG55 1949 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 OR1D2P34982 312 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 MDH1P40925 334 aaKnown RBP20.89■□□□□ 0.93
NECAB3-213ENST00000488489 XRCC4Q13426 336 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 KYNUQ16719 465 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 SLC45A4Q5BKX6 768 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 SPOUT1Q5T280 376 aaKnown RBP20.89■□□□□ 0.93
NECAB3-213ENST00000488489 NAT8LQ8N9F0 302 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 SHOC2Q9UQ13 582 aa20.89■□□□□ 0.93
NECAB3-213ENST00000488489 GOLGA6L10A6NI86 522 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 GOLGA8MH3BSY2 632 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 ACSL3O95573 720 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 ERCC2P18074 760 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 SMARCB1Q12824 385 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 PSMD5Q16401 504 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 PPIL6Q8IXY8 311 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 LGMNQ99538 433 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 OXCT2Q9BYC2 517 aaPredicted RBP20.88■□□□□ 0.93
NECAB3-213ENST00000488489 ARHGEF38Q9NXL2 777 aa20.88■□□□□ 0.93
NECAB3-213ENST00000488489 TTC4O95801 387 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 YWHAQP27348 245 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 HCAR3P49019 387 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 TPI1P60174 286 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 ICE2Q659A1 982 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 OTOP2Q7RTS6 562 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 RELL1Q8IUW5 271 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 QKIQ96PU8 341 aaKnown RBP eCLIP20.87■□□□□ 0.93
NECAB3-213ENST00000488489 CLSTN3Q9BQT9 956 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 TMEM106CQ9BVX2 250 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 NINJ2Q9NZG7 142 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 MRPL42Q9Y6G3 142 aaKnown RBP20.87■□□□□ 0.93
NECAB3-213ENST00000488489 NUP205Q92621 2012 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 CFAP69A5D8W1 941 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 TMEM63AO94886 807 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 LRIG2O94898 1065 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 ATF6P18850 670 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 IFFO1Q0D2I5 559 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 BTG3Q14201 252 aaPredicted RBP20.87■□□□□ 0.93
NECAB3-213ENST00000488489 PAFAH1B3Q15102 231 aaKnown RBP20.87■□□□□ 0.93
NECAB3-213ENST00000488489 PCGF5Q86SE9 256 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 CDKL3Q8IVW4 592 aaPredicted RBP20.87■□□□□ 0.93
NECAB3-213ENST00000488489 SLC39A11Q8N1S5 342 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 TMEM199Q8N511 208 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 CCDC110Q8TBZ0 833 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 SPATA17Q96L03 361 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 C9orf72Q96LT7 481 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 FOXP3Q9BZS1 431 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 PRDM16Q9HAZ2 1276 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 BACE2Q9Y5Z0 518 aa20.87■□□□□ 0.93
NECAB3-213ENST00000488489 MYZAPP0CAP1 466 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 VAV1P15498 845 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 EIF3BP55884 814 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 BASP1P80723 227 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 TAF10Q12962 218 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 FASTKD3Q14CZ7 662 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 KIAA1841Q6NSI8 718 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 C16orf59Q7L2K0 433 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 GIPC2Q8TF65 315 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 ZNF473Q8WTR7 871 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 C2orf15Q8WU43 125 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 ZNF558Q96NG5 402 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 CENPHQ9H3R5 247 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 TBX18O95935 607 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 SOD2P04179 222 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 MAGEA4P43358 317 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 HP1BP3Q5SSJ5 553 aaPredicted RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 SYCP2LQ5T4T6 812 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 MICALCLQ6ZW33 695 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 FBXO32Q969P5 355 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 SAYSD1Q9NPB0 183 aa20.86■□□□□ 0.93
NECAB3-213ENST00000488489 XPO7Q9UIA9 1087 aaKnown RBP20.86■□□□□ 0.93
NECAB3-213ENST00000488489 PTPRSQ13332 1948 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 KIAA0754O94854 1291 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 RTN3O95197 1032 aaPredicted RBP20.85■□□□□ 0.93
NECAB3-213ENST00000488489 CCR1P32246 355 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 KRT71Q3SY84 523 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 BRMS1LQ5PSV4 323 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 ARTNQ5T4W7 220 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 HOOK3Q86VS8 718 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 SUGP1Q8IWZ8 645 aaKnown RBP20.85■□□□□ 0.93
NECAB3-213ENST00000488489 NPWQ8N729 165 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 TFB1MQ8WVM0 346 aaKnown RBP20.85■□□□□ 0.93
NECAB3-213ENST00000488489 SIK2Q9H0K1 926 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 OSBPL2Q9H1P3 480 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 PAK5Q9P286 719 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 NEU3Q9UQ49 428 aa20.85■□□□□ 0.93
NECAB3-213ENST00000488489 MYO18AQ92614 2054 aaKnown RBP20.85■□□□□ 0.93
NECAB3-213ENST00000488489 PAGE1O75459 146 aa20.84■□□□□ 0.93
NECAB3-213ENST00000488489 BANF1O75531 89 aa20.84■□□□□ 0.93
NECAB3-213ENST00000488489 HSPA1AP0DMV8 641 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms