RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 GTF3C4Q9UKN8 822 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 SIT1Q9Y3P8 196 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 DENND4CQ5VZ89 1909 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 KANSL1LA0AUZ9 987 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ANKRD34BA5PLL1 514 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF233A6NK53 670 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SLC38A8A6NNN8 435 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF197O14709 1029 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 EIF3DO15371 548 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SUSD5O60279 629 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 HUS1O60921 280 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ECI2O75521 394 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TADA3O75528 432 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TNNC2P02585 160 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 IFNGR1P15260 489 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TNNI1P19237 187 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SCP2P22307 547 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ABCD1P33897 745 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 NDUFA8P51970 172 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 EPHA5P54756 1037 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 STARD6P59095 220 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 DLG4P78352 724 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 RBP5P82980 135 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 AMPD3Q01432 767 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CYP24A1Q07973 514 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ALCAMQ13740 583 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SNRNP35Q16560 246 aaKnown RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 FXNQ16595 210 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SOWAHAQ2M3V2 549 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TXNDC8Q6A555 127 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TRIM68Q6AZZ1 485 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SCARA5Q6ZMJ2 495 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TRAPPC11Q7Z392 1133 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ADAT2Q7Z6V5 191 aaKnown RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM150AQ86TG1 271 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ATG4DQ86TL0 474 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ARID3BQ8IVW6 561 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SCN4BQ8IWT1 228 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CEP57L1Q8IYX8 460 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ADGRF2Q8IZF7 708 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 MAML2Q8IZL2 1156 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 FSIP1Q8NA03 581 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 KBTBD7Q8WVZ9 684 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ERCC4Q92889 916 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 PSMG2Q969U7 264 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 MYLPFQ96A32 169 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 HPDLQ96IR7 371 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 MMS19Q96T76 1030 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 PKMYT1Q99640 499 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CGRRF1Q99675 332 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 LTB4R2Q9NPC1 389 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CRTAC1Q9NQ79 661 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 RBM12Q9NTZ6 932 aaKnown RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ERVK13-1Q9NX77 482 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 GTSE1Q9NYZ3 720 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 GDE1Q9NZC3 331 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ITGA11Q9UKX5 1188 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 DSEQ9UL01 958 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CFAP45Q9UL16 551 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 CCL26Q9Y258 94 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 ZFP37Q9Y6Q3 630 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-213ENST00000488386 PTPRDP23468 1912 aa6.31□□□□□ -1.4
CDHR3-213ENST00000488386 SSU72P8A0A1W2PR75 194 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 LRRIQ3A6PVS8 624 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CLDN5O00501 218 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF263O14978 683 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TBX1O43435 398 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 EXOC3O60645 756 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 HPXP02790 462 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 RPN1P04843 607 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CD3EP07766 207 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 HMGA1P17096 107 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 PSMC3P17980 439 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 BDNFP23560 247 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CCNE1P24864 410 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 PNPLA4P41247 253 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SYKP43405 635 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CDH8P55286 799 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MYL6P60660 151 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 KRT85P78386 507 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MYL7Q01449 175 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TSPY1Q01534 308 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 IFRD2Q12894 506 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 FZD5Q13467 585 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TAF12Q16514 161 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 KNOP1Q1ED39 458 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MDH1BQ5I0G3 518 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 NAIF1Q69YI7 327 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SPOPLQ6IQ16 392 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms