RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KIF20AO95235 890 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 EGFP01133 1207 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CYP17A1P05093 508 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PGRP06401 933 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 HOXC4P09017 264 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CISD3P0C7P0 127 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 MYL4P12829 197 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 HLA-EP13747 358 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 DRD2P14416 443 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 MX2P20592 715 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ACO1P21399 889 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CD27P26842 260 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TEAD1P28347 426 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PPP1R2P41236 205 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 IL12RB1P42701 662 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CTSKP43235 329 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TMPRSS3P57727 454 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ETF1P62495 437 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RING1Q06587 406 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SOX4Q06945 474 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 INCA1Q0VD86 236 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 BFSP1Q12934 665 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RESTQ13127 1097 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PEX6Q13608 980 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PON2Q15165 354 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TBC1D25Q3MII6 688 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 BTBD8Q5XKL5 378 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PRR23BQ6ZRT6 265 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SV2AQ7L0J3 742 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 KSR1Q8IVT5 923 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TPH2Q8IWU9 490 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ELOA2Q8IYF1 753 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TERB1Q8NA31 727 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 FBXO18Q8NFZ0 1043 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 OR2T3Q8NH03 318 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TTC17Q96AE7 1141 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ELMO3Q96BJ8 720 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 EXOC2Q96KP1 924 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TNIP3Q96KP6 325 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CLUHP3Q96NS8 147 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SLITRK1Q96PX8 696 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 FIZ1Q96SL8 496 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CGRRF1Q99675 332 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PREBQ9HCU5 417 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 GKN1Q9NS71 199 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ASNSD1Q9NWL6 643 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 KCNK4Q9NYG8 393 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 WSB2Q9NYS7 404 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 LRWD1Q9UFC0 647 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CYP8B1Q9UNU6 501 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TAF6LQ9Y6J9 622 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 NUP205Q92621 2012 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CEP192Q8TEP8 1941 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 A0A1B0GTQ1 180 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ZNF840PA6NDX5 716 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SLC22A31A6NKX4 558 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 KPNA7A9QM74 516 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 B4GALT5O43286 388 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TSPAN3O60637 253 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 USO1O60763 962 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 HUS1O60921 280 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ADAM11O75078 769 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RFPL3O75679 317 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RGS9O75916 674 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 PLA2G2AP14555 144 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 FGFR4P22455 802 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CHKAP35790 457 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CCT6AP40227 531 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CD97P48960 835 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RPL34P49207 117 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 LIG4P49917 911 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CSRP3P50461 194 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 YWHAEP62258 255 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 NTHL1P78549 312 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SULT2A1Q06520 285 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 COL9A2Q14055 689 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 STARD3Q14849 445 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 DHCR24Q15392 516 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SF1Q15637 639 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TRIP6Q15654 476 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 SKOR2Q2VWA4 1001 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ARHGAP17Q68EM7 881 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 LHFPL2Q6ZUX7 228 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 FMNL3Q8IVF7 1028 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 WDR75Q8IWA0 830 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 DIS3L2Q8IYB7 885 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ATL2Q8NHH9 583 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 KLHL6Q8WZ60 621 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RAD54LQ92698 747 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TCEAL4Q96EI5 215 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 MED8Q96G25 268 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 CALML4Q96GE6 196 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TMEM176AQ96HP8 235 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ANKRD36BP1Q96IX9 119 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ZMAT2Q96NC0 199 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 RPP25Q9BUL9 199 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 GBP3Q9H0R5 595 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 TNMDQ9H2S6 317 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 ATXN3LQ9H3M9 355 aa2.87□□□□□ -1.95
DEPDC1-203ENST00000488146 DPP3Q9NY33 737 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms