RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 PCLAFQ15004 111 aa14.6□□□□□ -0.07
COL16A1-214ENST00000488128 OGFRL1Q5TC84 451 aaPredicted RBP14.6□□□□□ -0.07
COL16A1-214ENST00000488128 ANLNQ9NQW6 1124 aa14.6□□□□□ -0.07
COL16A1-214ENST00000488128 SSX2IPQ9Y2D8 614 aa14.6□□□□□ -0.07
COL16A1-214ENST00000488128 VWA5AO00534 786 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 TRMUO75648 421 aaKnown RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PRKCHP24723 683 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 EMC2Q15006 297 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 TMEM259Q4ZIN3 620 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 KLC3Q6P597 504 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CPNE9Q8IYJ1 553 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PQLC3Q8N755 202 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 NIPA2Q8N8Q9 360 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CNTN6Q9UQ52 1028 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CHADO15335 359 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 FBXO21O94952 628 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 L1CAMP32004 1257 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 EMP3P54852 163 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 MTTPP55157 894 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 BCAR1P56945 870 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 OLIG2Q13516 323 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CA9Q16790 459 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 TMEM198Q66K66 360 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 KLHL35Q6PF15 583 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 DEFB132Q7Z7B7 95 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 SNX32Q86XE0 403 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PLD5Q8N7P1 536 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 BHLHE22Q8NFJ8 381 aaPredicted RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CMASQ8NFW8 434 aaPredicted RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 JADE3Q92613 823 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CATSPER2Q96P56 530 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 TWNKQ96RR1 684 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PKP2Q99959 881 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 KLC2Q9H0B6 622 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 RBM38Q9H0Z9 239 aaKnown RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 SPAG6O75602 509 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 STBD1O95210 358 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 NR3C2P08235 984 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PTPN1P18031 435 aaKnown RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 EPHA3P29320 983 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 CDH15P55291 814 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 ZNF699Q32M78 642 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 SNRNP48Q6IEG0 339 aaKnown RBP14.59□□□□□ -0.07
COL16A1-214ENST00000488128 TRNP1Q6NT89 227 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 XYLT1Q86Y38 959 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 MARVELD2Q8N4S9 558 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 MCPH1Q8NEM0 835 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 GSDMBQ8TAX9 411 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 SIGLEC10Q96LC7 697 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 ADPGKQ9BRR6 497 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 RSAD1Q9HA92 442 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PSMD13Q9UNM6 376 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 GJA3Q9Y6H8 435 aa14.59□□□□□ -0.07
COL16A1-214ENST00000488128 PLIN3O60664 434 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 RALBP11234 206 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 RGS7P49802 495 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 KLF10Q13118 480 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 NAPRTQ6XQN6 538 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 DCUN1D5Q9BTE7 237 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 CAAP1Q9H8G2 361 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 PAK5Q9P286 719 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 ZNF180Q9UJW8 692 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 DOCK5Q9H7D0 1870 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 BPTFQ12830 3046 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 CENPFP49454 3210 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 TMX2-CTNND1H3BSU7 103 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 PEX10O60683 326 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 LSM8O95777 96 aaKnown RBP14.58□□□□□ -0.08
COL16A1-214ENST00000488128 PDGFRAP16234 1089 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
COL16A1-214ENST00000488128 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.08
COL16A1-214ENST00000488128 SFNP31947 248 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 HMGCS2P54868 508 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 DCTN2Q13561 401 aaKnown RBP14.58□□□□□ -0.08
COL16A1-214ENST00000488128 KCTD21Q4G0X4 260 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 RARS2Q5T160 578 aaKnown RBP14.58□□□□□ -0.08
COL16A1-214ENST00000488128 TRIML2Q8N7C3 387 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 MIPOL1Q8TD10 442 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 ATP6V0A1Q93050 837 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 ERLEC1Q96DZ1 483 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 BTBD9Q96Q07 612 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 NDUFA13Q9P0J0 144 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 DOLKQ9UPQ8 538 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 HES2Q9Y543 173 aa14.58□□□□□ -0.08
COL16A1-214ENST00000488128 BIRC5O15392 142 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 TNFAIP8O95379 198 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 FAM58BPP0C7Q3 252 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 ERVK-10P10266 1014 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 SAT1P21673 171 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 TYK2P29597 1187 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 GABRB2P47870 512 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 PSMD7P51665 324 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 MCCD1P59942 119 aaPredicted RBP14.57□□□□□ -0.08
COL16A1-214ENST00000488128 TGFB2P61812 414 aa14.57□□□□□ -0.08
COL16A1-214ENST00000488128 TAP1Q03518 808 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms