RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CLP1Q92989 425 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 HAPLN3Q96S86 360 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 EPAS1Q99814 870 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 OLA1Q9NTK5 396 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PRKAG2Q9UGJ0 569 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PLAAQ9Y263 795 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TLR6Q9Y2C9 796 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 HACD1B0YJ81 288 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 KCNN4O15554 427 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 LILRB3O75022 631 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 PAGE1O75459 146 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 NUDT17P0C025 328 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 ERCC2P18074 760 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 FAM193AP78312 1265 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 NRG1Q02297 640 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 PRKD1Q15139 912 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 UBAP2Q5T6F2 1119 aaKnown RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 PSRC1Q6PGN9 363 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 PCGF5Q86SE9 256 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 HOOK3Q86VS8 718 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 VPS52Q8N1B4 723 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 ZNF276Q8N554 614 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 GIPC2Q8TF65 315 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 RNF34Q969K3 372 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 ZBTB9Q96C00 473 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 FCRL2Q96LA5 508 aaPredicted RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 SEMA4AQ9H3S1 761 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 FNIP2Q9P278 1114 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 STK39Q9UEW8 545 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 SNX10Q9Y5X0 201 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 RAD54BQ9Y620 910 aa9.75□□□□□ -0.85
SF3B1-211ENST00000487698 NYNRINQ9P2P1 1898 aaKnown RBP9.75□□□□□ -0.85
SF3B1-211ENST00000487698 FGF18O76093 207 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 IGLV3-27P01718 113 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 VAV1P15498 845 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 HMGA1P17096 107 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 HTR7P34969 479 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 ZNF844Q08AG5 666 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 HSP90B2PQ58FF3 399 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 SNX30Q5VWJ9 437 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 TRMT10CQ7L0Y3 403 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PPIL6Q8IXY8 311 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 FIBCD1Q8N539 461 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 NPWQ8N729 165 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 NAT8LQ8N9F0 302 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PWWP2AQ96N64 755 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 UBE2OQ9C0C9 1292 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 ZBP1Q9H171 429 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 CDC42EP4Q9H3Q1 356 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 YIPF1Q9Y548 306 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 INSL6Q9Y581 213 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PCDHB12Q9Y5F1 795 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 GBF1Q92538 1859 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 SMAPO00193 183 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 RIPK2O43353 540 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 OPA1O60313 960 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 GCATO75600 419 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 SLC2A3P11169 496 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PDK1Q15118 436 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 TRIP4Q15650 581 aaPredicted RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 ANKRD22Q5VYY1 191 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 CCDC25Q86WR0 208 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 TCEAL8Q8IYN2 117 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 AUTS2Q8WXX7 1259 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 HERVK_113Q902F9 699 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 TRMT2BQ96GJ1 504 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 MYRFLQ96LU7 910 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 RUFY1Q96T51 708 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PHACTR1Q9C0D0 580 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 KLC2Q9H0B6 622 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 MRPL17Q9NRX2 175 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 PAK5Q9P286 719 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 XPO7Q9UIA9 1087 aaKnown RBP9.74□□□□□ -0.85
SF3B1-211ENST00000487698 MAFFQ9ULX9 164 aa9.74□□□□□ -0.85
SF3B1-211ENST00000487698 CHD5Q8TDI0 1954 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 C5orf60A6NFR6 353 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 RNF40O75150 1001 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 TMEM63AO94886 807 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 TBX18O95935 607 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 CTSAP10619 480 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 DNAJB2P25686 324 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 EPHB2P29323 1055 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 MAGEA6P43360 314 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 TBX4P57082 545 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 CREMQ03060 361 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 KCNJ11Q14654 390 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 C10orf120Q5SQS8 335 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 PIK3R6Q5UE93 754 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 C4orf22Q6V702 233 aa9.73□□□□□ -0.85
SF3B1-211ENST00000487698 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms