RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 LZTR1Q8N653 840 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 TEX9Q8N6V9 391 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 EIF2AQ9BY44 585 aaKnown RBP12.13□□□□□ -0.47
TRA2B-214ENST00000487615 CDH9Q9ULB4 789 aa12.13□□□□□ -0.47
TRA2B-214ENST00000487615 ERI2A8K979 691 aaKnown RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 AVILO75366 819 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 STMN1P16949 149 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 GPD2P43304 727 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SGF29Q96ES7 293 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 LGMNQ99538 433 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 OR12D3Q9UGF7 316 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 CDYLQ9Y232 598 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 CLDN5O00501 218 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 DAB1O75553 588 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 CSPG5O95196 566 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SERPINB3P29508 390 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 NPY2RP49146 381 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SLC25A52Q3SY17 297 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 KYAT3Q6YP21 454 aaKnown RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 APBA2Q99767 749 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 CPNE1Q99829 537 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 ADAM2Q99965 735 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 MRGBPQ9NV56 204 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 PCDHB7Q9Y5E2 793 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 FCHO1O14526 889 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 MDM4O15151 490 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 NVLO15381 856 aaKnown RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 TPH1P17752 444 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 HARS2P49590 506 aaKnown RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 C15orf39Q6ZRI6 1047 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 SETD3Q86TU7 594 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-214ENST00000487615 KCNMB4Q86W47 210 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 ADAMTS5Q9UNA0 930 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
TRA2B-214ENST00000487615 F8W8V4 182 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 AIM2O14862 343 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CBX6O95503 412 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SERPINE1P05121 402 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 HADHAP40939 763 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 GLRBP48167 497 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 POU6F1Q14863 301 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TAF5Q15542 800 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SNX27Q96L92 541 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 HMGXB4Q9UGU5 601 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TELO2Q9Y4R8 837 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TREHO43280 583 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 NDUFS3O75489 264 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PGK1P00558 417 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TCF4P15884 667 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ERCC2P18074 760 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 DNAJB2P25686 324 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 INHBEP58166 350 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CRADDP78560 199 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ZNF280DQ6N043 979 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TAS2R42Q7RTR8 314 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 DDIASQ8IXT1 998 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SLC35B2Q8TB61 432 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SDCCAG3Q96C92 435 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 CSPG4P5Q96PW8 444 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 FBXO44Q9H4M3 255 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 SAR1AQ9NR31 198 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PTCH2Q9Y6C5 1203 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 COL4A1P02462 1669 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 H0YGN5 161 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 UNC5CO95185 931 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ANP32DO95626 131 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 AVPR1AP37288 418 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 PTPN9P43378 593 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-214ENST00000487615 GBE1Q04446 702 aa12.11□□□□□ -0.47
TRA2B-214ENST00000487615 TXNRD3NBQ6F5E7 133 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms