RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 RUFY3Q7L099 469 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 WDR36Q8NI36 951 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 GOLGA1Q92805 767 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 ABCG4Q9H172 646 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 USP29Q9HBJ7 922 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 CYLDQ9NQC7 956 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 KCND2Q9NZV8 630 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 ITGA11Q9UKX5 1188 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TPX2Q9ULW0 747 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 CLEC4EQ9ULY5 219 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 PDGFRBP09619 1106 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 OVGP1Q12889 678 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 SLC45A4Q5BKX6 768 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 ADALQ6DHV7 355 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 OR2T34Q8NGX1 318 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 SERAC1Q96JX3 654 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 APOLD1Q96LR9 279 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 SLC2A11Q9BYW1 496 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 CIPCQ9C0C6 399 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 OSBPL2Q9H1P3 480 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 RSPH9Q9H1X1 276 aaPredicted RBP12.26□□□□□ -0.45
TRIM56-204ENST00000487252 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 UCKL1Q9NWZ5 548 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 COMMD8Q9NX08 183 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 AGO2Q9UKV8 859 aaKnown RBP12.26□□□□□ -0.45
TRIM56-204ENST00000487252 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
TRIM56-204ENST00000487252 FAM47DPA6NHR8 397 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 TISP43B9A030 160 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 KLKB1P03952 638 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 WT1P19544 449 aaPredicted RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 SLC5A2P31639 672 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 DCTP40126 519 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 PDX1P52945 283 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 SLC12A3P55017 1021 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 OXCT1P55809 520 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 GTF2BQ00403 316 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 GOLGA8FQ08AF8 430 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 GOLGA8DPQ0D2H9 430 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 L1TD1Q5T7N2 865 aaKnown RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 KLHDC10Q6PID8 442 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 TMC6Q7Z403 805 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 CSGALNACT2Q8N6G5 542 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF366Q8N895 744 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 SYT2Q8N9I0 419 aaPredicted RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 WASF1Q92558 559 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 FIZ1Q96SL8 496 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 MMTAG2Q9BU76 263 aaKnown RBP12.25□□□□□ -0.45
TRIM56-204ENST00000487252 NACA2Q9H009 215 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 FBXL12Q9NXK8 326 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 NCKAP1Q9Y2A7 1128 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 APCP25054 2843 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 DNHD1Q96M86 4753 aa12.25□□□□□ -0.45
TRIM56-204ENST00000487252 LRRC72A6NJI9 287 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 TCEA3O75764 348 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 RNF224P0DH78 156 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF131P52739 623 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 SLC5A3P53794 718 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 CYP4F2P78329 520 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 RBP5P82980 135 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 KCNAB2Q13303 367 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF174Q15697 407 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 ARSHQ5FYA8 562 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 SLFN12LQ6IEE8 588 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 NAPEPLDQ6IQ20 393 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 HS2ST1Q7LGA3 356 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 C14orf80Q86SX3 495 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 IFI44Q8TCB0 444 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 FAM84AQ96KN4 292 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 PCNX1Q96RV3 2341 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 B3GNT5Q9BYG0 378 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 NEUROG2Q9H2A3 272 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 NLGN3Q9NZ94 848 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 ARHGAP20Q9P2F6 1191 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 FZD4Q9ULV1 537 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 MTORP42345 2549 aa12.24□□□□□ -0.45
TRIM56-204ENST00000487252 RP1P56715 2156 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 CCDC187A0A096LP49 1063 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 VPS37CA5D8V6 355 aaPredicted RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 CLDN5O00501 218 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 MAGEC1O60732 1142 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms