RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SERPINB6P35237 376 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 HARS2P49590 506 aaKnown RBP12.56□□□□□ -0.4
COL3A1-206ENST00000487010 ABCE1P61221 599 aaKnown RBP12.56□□□□□ -0.4
COL3A1-206ENST00000487010 PDK3Q15120 406 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 TRIP10Q15642 601 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 INSCQ1MX18 579 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 VWA5B1Q5TIE3 1220 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 OLFML1Q6UWY5 402 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 FRMD7Q6ZUT3 714 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 PIP4K2CQ8TBX8 421 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 NAT14Q8WUY8 206 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 CDKL2Q92772 493 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL3A1-206ENST00000487010 HPDLQ96IR7 371 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 QKIQ96PU8 341 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL3A1-206ENST00000487010 BTBD9Q96Q07 612 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 NDNQ99608 321 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
COL3A1-206ENST00000487010 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
COL3A1-206ENST00000487010 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 AP1G1O43747 822 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 GJB1P08034 283 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 MLNP12872 115 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ZFXP17010 805 aaPredicted RBP12.55□□□□□ -0.4
COL3A1-206ENST00000487010 PRDX6P30041 224 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 NR2C2P49116 596 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 CHN2P52757 468 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 HDAC4P56524 1084 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 TBL3Q12788 808 aaKnown RBP12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ANKRD20A4Q4UJ75 823 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
COL3A1-206ENST00000487010 CASC4Q6P4E1 433 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 KCNT2Q6UVM3 1135 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 UGT2A3Q6UWM9 527 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 EXOC8Q8IYI6 725 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 HIPK4Q8NE63 616 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 CLMNQ96JQ2 1002 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 TMEM216Q9P0N5 145 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 COPG2Q9UBF2 871 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 MORF4L1Q9UBU8 362 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 KIAA1257Q9ULG3 409 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 SSX2IPQ9Y2D8 614 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 LOC100653049A0A140TA62 436 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 SMIM31A0A1B0GVY4 71 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 KRT34O76011 436 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ITGA2BP08514 1039 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 STAG3L1P0CL83 205 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 RALBP11234 206 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 COX4I1P13073 169 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ETS2P15036 469 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 MTTPP55157 894 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 CRADDP78560 199 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 SLC6A3Q01959 620 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 FOLH1Q04609 750 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 NAB1Q13506 487 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 PEX6Q13608 980 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 STILQ15468 1287 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 METTL7BQ6UX53 244 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 PHTF2Q8N3S3 785 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ICA1LQ8NDH6 482 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 CHST13Q8NET6 341 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 EZH1Q92800 747 aaPredicted RBP12.55□□□□□ -0.4
COL3A1-206ENST00000487010 MINDY3Q9H8M7 445 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 ARHGAP26Q9UNA1 814 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 PSAT1Q9Y617 370 aa12.55□□□□□ -0.4
COL3A1-206ENST00000487010 DCXO43602 365 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 DESP17661 470 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 FDFT1P37268 417 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 ZNF280AP59817 542 aaPredicted RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 MBTD1Q05BQ5 628 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 DPYSL2Q16555 572 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 LY6KQ17RY6 165 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 FSCBQ5H9T9 825 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 OGFRL1Q5TC84 451 aaPredicted RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 DCAF15Q66K64 600 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 HEATR6Q6AI08 1181 aaKnown RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 LRRC8BQ6P9F7 803 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 SATL1Q86VE3 508 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 RTKNQ9BST9 563 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 NT5C1AQ9BXI3 368 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
COL3A1-206ENST00000487010 EPB41L1Q9H4G0 881 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
COL3A1-206ENST00000487010 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms