RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CADM4Q8NFZ8 388 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 ABCB8Q9NUT2 735 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 WASF3Q9UPY6 502 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 CTNND2Q9UQB3 1225 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 NFE2L3Q9Y4A8 694 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 CKAP5Q14008 2032 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 CACNA1EQ15878 2313 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 USP24Q9UPU5 2620 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 BIN1O00499 593 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 CALCAP01258 141 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 HLA-EP13747 358 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 SLC11A2P49281 568 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 MORC3Q14149 939 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 FNDC3BQ53EP0 1204 aaKnown RBP17.85■□□□□ 0.45
SMC4-216ENST00000485645 NUGGCQ68CJ6 796 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 ARHGEF19Q8IW93 802 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 TRIM59Q8IWR1 403 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 AHI1Q8N157 1196 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMC4-216ENST00000485645 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 OR2T3Q8NH03 318 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 CLEC4CQ8WTT0 213 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 DNASE2BQ8WZ79 361 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 NUP58Q9BVL2 599 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 IRX2Q9BZI1 471 aaPredicted RBP17.85■□□□□ 0.45
SMC4-216ENST00000485645 MIS12Q9H081 205 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 DNAAF2Q9NVR5 837 aaKnown RBP17.85■□□□□ 0.45
SMC4-216ENST00000485645 GGA2Q9UJY4 613 aa17.85■□□□□ 0.45
SMC4-216ENST00000485645 A0A1B0GTW7 788 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 IRAK2O43187 625 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 TOP3BO95985 862 aaKnown RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 IGLV3-19P01714 112 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 PROS1P07225 676 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 PABPC1P11940 636 aaKnown RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 SPINK2P20155 84 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 STX17P56962 302 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 TBX4P57082 545 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 SIM1P81133 766 aaPredicted RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 RING1Q06587 406 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 CAMK2GQ13555 558 aaPredicted RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 MPP7Q5T2T1 576 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 PIK3R6Q5UE93 754 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 DCAF12L1Q5VU92 463 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 RFWD3Q6PCD5 774 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 KIAA0907Q7Z7F0 614 aaPredicted RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 ADIPOR2Q86V24 386 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 CACUL1Q86Y37 369 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 CYB5D2Q8WUJ1 264 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 SRRTQ9BXP5 876 aaKnown RBP17.84■□□□□ 0.45
SMC4-216ENST00000485645 TMEM245Q9H330 911 aa17.84■□□□□ 0.45
SMC4-216ENST00000485645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMC4-216ENST00000485645 GOLGA6L7A0A1B0GV03 622 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 SPAARA0A1B0GVQ0 90 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 METTL12A8MUP2 240 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 C1QTNF9BB2RNN3 333 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ACSL4O60488 711 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 TBL1XO60907 577 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ATP5BP06576 529 aaKnown RBP17.83■□□□□ 0.44
SMC4-216ENST00000485645 C1QTNF9P0C862 333 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 CD59P13987 128 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 SGSHP51688 502 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 MARSP56192 900 aaKnown RBP17.83■□□□□ 0.44
SMC4-216ENST00000485645 PAK1Q13153 545 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 SLC14A1Q13336 389 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 MBLAC2Q68D91 279 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 UNQ6494/PRO21346Q6UXR6 183 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ZNF557Q8N988 423 aaPredicted RBP17.83■□□□□ 0.44
SMC4-216ENST00000485645 AZIN2Q96A70 460 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 KREMEN1Q96MU8 473 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 DDX50Q9BQ39 737 aaKnown RBP17.83■□□□□ 0.44
SMC4-216ENST00000485645 SCNM1Q9BWG6 230 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ZDHHC5Q9C0B5 715 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 MIR1-1HGQ9H1L0 117 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 ST7Q9NRC1 585 aa17.83■□□□□ 0.44
SMC4-216ENST00000485645 SART1O43290 800 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 DLDP09622 509 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 KRT5P13647 590 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 POLR2EP19388 210 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 SLC6A4P31645 630 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 RDXP35241 583 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 ACADSBP45954 432 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 GRIK2Q13002 908 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 HNRNPDQ14103 355 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 FAM133BQ5BKY9 247 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 FAM124AQ86V42 546 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 SCUBE3Q8IX30 993 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 ZCCHC9Q8N567 271 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 ZNF366Q8N895 744 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 FAM149B1Q96BN6 582 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 SERPINB11Q96P15 392 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
SMC4-216ENST00000485645 LHX5Q9H2C1 402 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 FBRSQ9HAH7 460 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 STIM2Q9P246 746 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 CNTN6Q9UQ52 1028 aa17.82■□□□□ 0.44
SMC4-216ENST00000485645 FRYQ5TBA9 3013 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms