RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 WFIKKN2Q8TEU8 576 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 SLC35F5Q8WV83 523 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 TMEM245Q9H330 911 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 ABCB8Q9NUT2 735 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 EIF2B4Q9UI10 523 aaKnown RBP20.05■□□□□ 0.8
COL27A1-205ENST00000485397 GGA2Q9UJY4 613 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 NFE2L3Q9Y4A8 694 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 IGF2RP11717 2491 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 CKAP5Q14008 2032 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 TMEM8BA6NDV4 472 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 H0Y626 953 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 TRIM16O95361 564 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 LATS1O95835 1130 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 PAEPP09466 180 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 CD44P16070 742 aaKnown RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 BRD2P25440 801 aaKnown RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 ZNF445P59923 1031 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 BNC1Q01954 994 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 CAMK2GQ13555 558 aaPredicted RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 HNRNPDQ14103 355 aaKnown RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 TRIP6Q15654 476 aaKnown RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 MSANTD2Q6P1R3 559 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 RFWD3Q6PCD5 774 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 KIAA0907Q7Z7F0 614 aaPredicted RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 WFDC5Q8TCV5 224 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 CLEC4CQ8WTT0 213 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 NT5C1BQ96P26 610 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 ZDHHC5Q9C0B5 715 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 LHX5Q9H2C1 402 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 IL21RQ9HBE5 538 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 METTL14Q9HCE5 456 aaKnown RBP20.04■□□□□ 0.8
COL27A1-205ENST00000485397 PLA2G4CQ9UP65 541 aa20.04■□□□□ 0.8
COL27A1-205ENST00000485397 M0QYV0 167 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 BCAT2O15382 392 aaPredicted RBP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 PABPC1P11940 636 aaKnown RBP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 RDXP35241 583 aaKnown RBP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 CNGA2Q16280 664 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 PTPRNQ16849 979 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 CCDC40Q4G0X9 1142 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 MBLAC2Q68D91 279 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 NAXDQ8IW45 347 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 PPM1KQ8N3J5 372 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 ZCCHC14Q8WYQ9 949 aaKnown RBP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 C6orf106Q9H6K1 298 aaPredicted RBP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL27A1-205ENST00000485397 PCDHB9Q9Y5E1 797 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 SLCO1B1Q9Y6L6 691 aa20.03■□□□□ 0.8
COL27A1-205ENST00000485397 PSMA7O14818 248 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 TBL1XO60907 577 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 IGLV3-27P01718 113 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 SLC6A4P31645 630 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 CD70P32970 193 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 ACSL1P33121 698 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 ZNF423Q2M1K9 1284 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 FAM133BQ5BKY9 247 aaKnown RBP20.02■□□□□ 0.8
COL27A1-205ENST00000485397 PIK3R6Q5UE93 754 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 RRAGAQ7L523 313 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 RAB44Q7Z6P3 723 aaPredicted RBP20.02■□□□□ 0.8
COL27A1-205ENST00000485397 AHI1Q8N157 1196 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 C1orf216Q8TAB5 229 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 LMO3Q8TAP4 145 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 IRGQQ8WZA9 623 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 SNX19Q92543 992 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 DHTKD1Q96HY7 919 aaPredicted RBP20.02■□□□□ 0.8
COL27A1-205ENST00000485397 CEP63Q96MT8 703 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 TIGD1Q96MW7 591 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 GAREM1Q9H706 876 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 PRSS16Q9NQE7 514 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 MAN1B1Q9UKM7 699 aa20.02■□□□□ 0.8
COL27A1-205ENST00000485397 NUMA1Q14980 2115 aa20.02■□□□□ 0.79
COL27A1-205ENST00000485397 CFAP47Q6ZTR5 3102 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 SRRM3A6NNA2 597 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-205ENST00000485397 PMM2O15305 246 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 ACSL4O60488 711 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 LTFP02788 710 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 TBX4P57082 545 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 RPS14P62263 151 aaKnown RBP20.01■□□□□ 0.79
COL27A1-205ENST00000485397 STIM1Q13586 685 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 KLHL10Q6JEL2 608 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 ARHGEF19Q8IW93 802 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 UNC45BQ8IWX7 931 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 PNPLA1Q8N8W4 532 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 GTPBP4Q9BZE4 634 aaKnown RBP20.01■□□□□ 0.79
COL27A1-205ENST00000485397 MIS12Q9H081 205 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 MTG2Q9H4K7 406 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 STIM2Q9P246 746 aa20.01■□□□□ 0.79
COL27A1-205ENST00000485397 FNDC3AQ9Y2H6 1198 aaKnown RBP20.01■□□□□ 0.79
COL27A1-205ENST00000485397 CHD6Q8TD26 2715 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 A0A1B0GVT2 93 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 FAM221BA6H8Z2 402 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 CBFA2T3O75081 653 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 DLDP09622 509 aaKnown RBP20■□□□□ 0.79
COL27A1-205ENST00000485397 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 SLC11A2P49281 568 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 HLA-BQ31612 363 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 NUGGCQ68CJ6 796 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 NADSYN1Q6IA69 706 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 TTI2Q6NXR4 508 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 SETD7Q8WTS6 366 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms