RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FAM163BP0C2L3 166 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 SETSIPP0DME0 302 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 KRT3P12035 628 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 PAX3P23760 479 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 GBP1P32455 592 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 GSCP56915 257 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 MAP3K7CLP57077 242 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 SLC8A3P57103 927 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 DR1Q01658 176 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 NNTQ13423 1086 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 HLTFQ14527 1009 aaKnown RBP eCLIP7.22□□□□□ -1.253e-6■■□□□ 13.4
BRCA1-216ENST00000484087 CASP8Q14790 479 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 UBXN2BQ14CS0 331 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ACAP1Q15027 740 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 HADHQ16836 314 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 C2CD6Q53TS8 623 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 DENND1BQ6P3S1 775 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 TXNDC11Q6PKC3 985 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 LCLAT1Q6UWP7 414 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 C4orf50Q6ZRC1 276 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ITIH5Q86UX2 942 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 SLC13A5Q86YT5 568 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 CCDC50Q8IVM0 306 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ARL14EPQ8N8R7 260 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 FNIP1Q8TF40 1166 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 C2orf15Q8WU43 125 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ALG3Q92685 438 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 USP13Q92995 863 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 MAGOHBQ96A72 148 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ELSPBP1Q96BH3 223 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 RBM41Q96IZ5 413 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 TNIP3Q96KP6 325 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 MCEEQ96PE7 176 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 SMOQ99835 787 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 FUT8Q9BYC5 575 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 DDX47Q9H0S4 455 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 BRD9Q9H8M2 597 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 VIPAS39Q9H9C1 493 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 GDF3Q9NR23 364 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ST7Q9NRC1 585 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 FAM114A2Q9NRY5 505 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 SMPD4Q9NXE4 827 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 GDE1Q9NZC3 331 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 FEZ2Q9UHY8 353 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 TSPAN16Q9UKR8 245 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 NDRG2Q9UN36 371 aaKnown RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 KIAA1549LQ6ZVL6 1849 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM191CA6NGB0 347 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 SIGLEC16A6NMB1 481 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 GOLGA8SH3BPF8 625 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 TULP2O00295 520 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ARNTLO00327 626 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 O00370 1275 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 MAP2K7O14733 419 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 RNF8O76064 485 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CSH1P0DML2 217 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CSH2P0DML3 217 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PYGMP11217 842 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ARSAP15289 507 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PSMC3P17980 439 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 AOC1P19801 751 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PSMA2P25787 234 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 MARCKSL1P49006 195 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 SLC5A3P53794 718 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 RPL10AP62906 217 aaKnown RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 TAF10Q12962 218 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 MLF2Q15773 248 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PTPN20Q4JDL3 420 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 SLC44A4Q53GD3 710 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PPP1R26Q5T8A7 1209 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 LRRC38Q5VT99 294 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 DCAF12L1Q5VU92 463 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 DENND5BQ6ZUT9 1274 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 SND1Q7KZF4 910 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 RTL10Q7L3V2 364 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 BMP8AQ7Z5Y6 402 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ADAT2Q7Z6V5 191 aaKnown RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ZDHHC17Q8IUH5 632 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CCDC105Q8IYK2 499 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 KATNAL2Q8IYT4 538 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 RCOR2Q8IZ40 523 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CMTM8Q8IZV2 173 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 NIPA2Q8N8Q9 360 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 EXD1Q8NHP7 514 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 GRK7Q8WTQ7 553 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 WBP2Q969T9 261 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CHFRQ96EP1 664 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 FUBP3Q96I24 572 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 GCNAQ96QF7 691 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 RUFY1Q96T51 708 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 NCAPGQ9BPX3 1015 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 TRMT61BQ9BVS5 477 aaKnown RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 TASP1Q9H6P5 420 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 SLC2A4RGQ9NR83 387 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 GMIPQ9P107 970 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 AMACRQ9UHK6 382 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms