RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZNF638Q14966 1978 aaKnown RBP27.11■■□□□ 1.93
SHOX2-204ENST00000483851 NCAM2O15394 837 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 OR1D2P34982 312 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 USP46P62068 366 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 PDK1Q15118 436 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 ZNF461Q8TAF7 563 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 CASP10Q92851 521 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 FERMT1Q9BQL6 677 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 SEMA4AQ9H3S1 761 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 TLR6Q9Y2C9 796 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 GOLGA6L10A6NI86 522 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 EIF3HO15372 352 aaKnown RBP eCLIP27.1■■□□□ 1.93
SHOX2-204ENST00000483851 KCNN4O15554 427 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 ABLIM3O94929 683 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 MYZAPP0CAP1 466 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 RBL1P28749 1068 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 FOXR1Q6PIV2 292 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 CCDC25Q86WR0 208 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 ZNF276Q8N554 614 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 YME1L1Q96TA2 773 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 C10orf88Q9H8K7 445 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 ETNK2Q9NVF9 386 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 GMIPQ9P107 970 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 MAFFQ9ULX9 164 aa27.1■■□□□ 1.93
SHOX2-204ENST00000483851 ACRP10323 421 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 CHKAP35790 457 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 NRG1Q02297 640 aaPredicted RBP27.09■■□□□ 1.93
SHOX2-204ENST00000483851 AGBL2Q5U5Z8 902 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 TFB1MQ8WVM0 346 aaKnown RBP27.09■■□□□ 1.93
SHOX2-204ENST00000483851 PRCCQ92733 491 aaPredicted RBP27.09■■□□□ 1.93
SHOX2-204ENST00000483851 CLSTN3Q9BQT9 956 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 BRD8Q9H0E9 1235 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 OSER1Q9NX31 292 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 PRKAG2Q9UGJ0 569 aa27.09■■□□□ 1.93
SHOX2-204ENST00000483851 FAM72CH0Y354 149 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 RIPK2O43353 540 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 GCATO75600 419 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 ZDHHC11BP0C7U3 371 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 ERCC2P18074 760 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 NR1D1P20393 614 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 PGFP49763 221 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 FAM72AQ5TYM5 149 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 FAM72DQ6L9T8 149 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 FAM117BQ6P1L5 589 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 FAM72BQ86X60 149 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 NAT8LQ8N9F0 302 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 OVCA2Q8WZ82 227 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 CPT1BQ92523 772 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 CDC42EP4Q9H3Q1 356 aaKnown RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 C5orf60A6NFR6 353 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 PPP1R12AO14974 1030 aaPredicted RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 SERPINB6P35237 376 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 GNGT1P63211 74 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 TAF10Q12962 218 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 CBLBQ13191 982 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 MTA1Q13330 715 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 ACBD5Q5T8D3 534 aaPredicted RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 CDK5RAP1Q96SZ6 601 aaKnown RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 TMEM109Q9BVC6 243 aa27.08■■□□□ 1.93
SHOX2-204ENST00000483851 FRMD8Q9BZ67 464 aaPredicted RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 UBE2OQ9C0C9 1292 aaKnown RBP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.08■■□□□ 1.93
SHOX2-204ENST00000483851 SLC38A8A6NNN8 435 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 KCNU1A8MYU2 1149 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 ADAM12O43184 909 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 MFSD11O43934 449 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 TTC4O95801 387 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 FGBP02675 491 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 URODP06132 367 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 CREMQ03060 361 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 SLC29A2Q14542 456 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 DNAJC21Q5F1R6 531 aaKnown RBP27.07■■□□□ 1.92
SHOX2-204ENST00000483851 HEATR6Q6AI08 1181 aaKnown RBP27.07■■□□□ 1.92
SHOX2-204ENST00000483851 SLC39A13Q96H72 371 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 C1orf74Q96LT6 269 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 RBM15Q96T37 977 aaKnown RBP eCLIP27.07■■□□□ 1.92
SHOX2-204ENST00000483851 SFMBT1Q9UHJ3 866 aa27.07■■□□□ 1.92
SHOX2-204ENST00000483851 CHADO15335 359 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 LRIG2O94898 1065 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 HTRA4P83105 476 aaPredicted RBP27.06■■□□□ 1.92
SHOX2-204ENST00000483851 OTOP2Q7RTS6 562 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 PDZD8Q8NEN9 1154 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.06■■□□□ 1.92
SHOX2-204ENST00000483851 PCDHB12Q9Y5F1 795 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 SOAT2O75908 522 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 ATF6P18850 670 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 HOXC13P31276 330 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 MAGEA6P43360 314 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 IFFO1Q0D2I5 559 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 RAB33AQ14088 237 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 PRKD1Q15139 912 aaPredicted RBP27.06■■□□□ 1.92
SHOX2-204ENST00000483851 CENPUQ71F23 418 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 TMCO2Q7Z6W1 182 aaPredicted RBP27.06■■□□□ 1.92
SHOX2-204ENST00000483851 TTC25Q96NG3 672 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 KLC2Q9H0B6 622 aa27.06■■□□□ 1.92
SHOX2-204ENST00000483851 PTPRSQ13332 1948 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 FGF10O15520 208 aaPredicted RBP27.05■■□□□ 1.92
SHOX2-204ENST00000483851 GJB5O95377 273 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 MX2P20592 715 aa27.05■■□□□ 1.92
SHOX2-204ENST00000483851 KPNA1P52294 538 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms