RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SERPINB11Q96P15 392 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 SPG21Q9NZD8 308 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 AFF4Q9UHB7 1163 aaKnown RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 SLC38A8A6NNN8 435 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 LRIG2O94898 1065 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 MAP3K6O95382 1288 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 SHBGP04278 402 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 HOXC13P31276 330 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 GLUD2P49448 558 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TAF10Q12962 218 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 PDK1Q15118 436 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 PRKD1Q15139 912 aaPredicted RBP14.5□□□□□ -0.09
CLK3-204ENST00000483723 AGBL2Q5U5Z8 902 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 RASIP1Q5U651 963 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 MANEALQ5VSG8 457 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 ANKRD22Q5VYY1 191 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TPGS2Q68CL5 300 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 PDZD4Q76G19 769 aaPredicted RBP14.5□□□□□ -0.09
CLK3-204ENST00000483723 ZNF461Q8TAF7 563 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TFB1MQ8WVM0 346 aaKnown RBP14.5□□□□□ -0.09
CLK3-204ENST00000483723 FBXO32Q969P5 355 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TMEM169Q96HH4 297 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 C1orf74Q96LT6 269 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 RBM15Q96T37 977 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■■■■□ 20.2
CLK3-204ENST00000483723 EPAS1Q99814 870 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TLR8Q9NR97 1041 aaKnown RBP14.5□□□□□ -0.09
CLK3-204ENST00000483723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.5□□□□□ -0.09
CLK3-204ENST00000483723 NINJ2Q9NZG7 142 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 VPS18Q9P253 973 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 TLR6Q9Y2C9 796 aa14.5□□□□□ -0.09
CLK3-204ENST00000483723 KIAA0100Q14667 2235 aaKnown RBP14.5□□□□□ -0.09
CLK3-204ENST00000483723 KIAA1671Q9BY89 1806 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 E7ESA3 106 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 CHADO15335 359 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 EIF3HO15372 352 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLK3-204ENST00000483723 ZNF189O75820 626 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 ATF6P18850 670 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 ACTN2P35609 894 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 MAGEA4P43358 317 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 HTRA4P83105 476 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 GABPB1Q06547 395 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 KCNJ11Q14654 390 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 SPOUT1Q5T280 376 aaKnown RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 KIAA1841Q6NSI8 718 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 FAM117BQ6P1L5 589 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 CROCCP2Q86T23 111 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 GPR152Q8TDT2 470 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 RNF34Q969K3 372 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 FCRL2Q96LA5 508 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 SEPT5Q99719 369 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 ROPN1BQ9BZX4 212 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 UBE2OQ9C0C9 1292 aaKnown RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 ROPN1Q9HAT0 212 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 OLA1Q9NTK5 396 aaKnown RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 NEU3Q9UQ49 428 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 SNX10Q9Y5X0 201 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 TCRBV7S3A2A0A539 114 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 HMGB1P1B2RPK0 211 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 NCAM2O15394 837 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 PAGE1O75459 146 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 MYZAPP0CAP1 466 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 SLC2A3P11169 496 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 VAV1P15498 845 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 RPL17P18621 184 aaKnown RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 MLLT6P55198 1093 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 RAB33AQ14088 237 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 KYNUQ16719 465 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 SNX30Q5VWJ9 437 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 HTR3CQ8WXA8 447 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 ATP6V1G3Q96LB4 118 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 KLC2Q9H0B6 622 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 BRD8Q9H0E9 1235 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 PRDM12Q9H4Q4 367 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 LRRC4CQ9HCJ2 640 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 ADAM21Q9UKJ8 722 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 NUDT5Q9UKK9 219 aa14.49□□□□□ -0.09
CLK3-204ENST00000483723 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
CLK3-204ENST00000483723 ALPK3Q96L96 1907 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 GOLGA6CA6NDK9 693 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 MSI1O43347 362 aaKnown RBP14.48□□□□□ -0.09
CLK3-204ENST00000483723 LILRB3O75022 631 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 TCEA3O75764 348 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 TMEM63AO94886 807 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 SEC24AO95486 1093 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 ABHD2P08910 425 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 LINC00271P0C7V0 271 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 GOLGA6DP0CG33 693 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 PPIGQ13427 754 aaKnown RBP eCLIP14.48□□□□□ -0.094e-7■■■□□ 16.8
CLK3-204ENST00000483723 TRIP4Q15650 581 aaPredicted RBP14.48□□□□□ -0.09
CLK3-204ENST00000483723 HEATR6Q6AI08 1181 aaKnown RBP14.48□□□□□ -0.09
CLK3-204ENST00000483723 CENPUQ71F23 418 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 LRRN4Q8WUT4 740 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 OVCA2Q8WZ82 227 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 FRMD8Q9BZ67 464 aaPredicted RBP14.48□□□□□ -0.09
CLK3-204ENST00000483723 SAYSD1Q9NPB0 183 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 DNAJC17Q9NVM6 304 aaKnown RBP14.48□□□□□ -0.09
CLK3-204ENST00000483723 GOLGA6AQ9NYA3 693 aa14.48□□□□□ -0.09
CLK3-204ENST00000483723 A0A0A0MRY4 1105 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 PPP1R12AO14974 1030 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms