RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 GPR68Q15743 365 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 CCNG2Q16589 344 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 FAM187BQ17R55 369 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 CCDC96Q2M329 555 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 LIPMQ5VYY2 423 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 ACSM6Q6P461 480 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 BRINP3Q76B58 766 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 LRRC8DQ7L1W4 858 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 KRT27Q7Z3Y8 459 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 PXKQ7Z7A4 578 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 GPR149Q86SP6 731 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 ARMC8Q8IUR7 673 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 DIS3L2Q8IYB7 885 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 CNTROBQ8N137 903 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 ANKRD35Q8N283 1001 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 FSIP1Q8NA03 581 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 SNRNP27Q8WVK2 155 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 FAM89AQ96GI7 184 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 LENG8Q96PV6 779 aaPredicted RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 PPP1R10Q96QC0 940 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 DCLRE1CQ96SD1 692 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 ELOVL1Q9BW60 279 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 AKIP1Q9NQ31 210 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 KRT84Q9NSB2 600 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 SEPT11Q9NVA2 429 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 INTS13Q9NVM9 706 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D14Q9P2M4 693 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 HDAC6Q9UBN7 1215 aa4.01□□□□□ -1.77
CLCC1-209ENST00000482889 SLC25A10Q9UBX3 287 aaPredicted RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 NKX1-2Q9UD57 310 aaPredicted RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 ADD3Q9UEY8 706 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 TDRD9Q8NDG6 1382 aaKnown RBP4.01□□□□□ -1.77
CLCC1-209ENST00000482889 KDM3AQ9Y4C1 1321 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 SYNDIG1LA6NDD5 238 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 NPIPB15A6NHN6 443 aaPredicted RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 SH2D7A6NKC9 451 aaPredicted RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 SAC3D1A6NKF1 404 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 C17orf100A8MU93 164 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 GOLGA6L6A8MZA4 724 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 DIRC3C9JPN6 131 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 TCERG1O14776 1098 aaKnown RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 SYN3O14994 580 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 ORC4O43929 436 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 SPDEFO95238 335 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 SGPL1O95470 568 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 CYP3A4P08684 503 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 IL6RP08887 468 aaPredicted RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 RPS6KB1P23443 525 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 PCSK6P29122 969 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 GKP32189 559 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 CXCR5P32302 372 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 GALNSP34059 522 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 KRT20P35900 424 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 TAS2R50P59544 299 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 E2F1Q01094 437 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 DNASE1L3Q13609 305 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 TP53BP2Q13625 1128 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 TOB2Q14106 344 aaPredicted RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 PUM1Q14671 1186 aaKnown RBP eCLIP4□□□□□ -1.77
CLCC1-209ENST00000482889 BEAN1Q3B7T3 259 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 CCDC129Q6ZRS4 1044 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 ZSCAN2Q7Z7L9 614 aaPredicted RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 PALM2Q8IXS6 379 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 CPEB3Q8NE35 698 aaKnown RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 SSH3Q8TE77 659 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 XAGE5Q8WWM1 108 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 NELL1Q92832 810 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4□□□□□ -1.77
CLCC1-209ENST00000482889 HDHD5Q9BXW7 423 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 LMAN2LQ9H0V9 348 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 GLOD4Q9HC38 313 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 GALNT9Q9HCQ5 603 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 PDE11AQ9HCR9 933 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 FBXO28Q9NVF7 368 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 THAP1Q9NVV9 213 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 HAUS2Q9NVX0 235 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 MTMR4Q9NYA4 1195 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 NKIRAS2Q9NYR9 191 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 CNOT7Q9UIV1 285 aaKnown RBP4□□□□□ -1.77
CLCC1-209ENST00000482889 BAG5Q9UL15 447 aa4□□□□□ -1.77
CLCC1-209ENST00000482889 TRGV11A0A075B6L2 103 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3DA0A087WVF3 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3IA0A087WXS9 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3EA0A087X179 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3KA0A087X1G2 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3BA6NDS4 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3FA6NER0 549 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 MBD3L5A6NJ08 208 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 NPIPB13A6NJU9 1138 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 NPIPB5A8MRT5 1133 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3LB9A6J9 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 NPIPB4C9JG80 1138 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CCER2I3L3R5 266 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TNFSF14O43557 240 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 PLOD3O60568 738 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 ADRB2P07550 413 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3HP0C7X1 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CREB1P16220 341 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms