RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 EFNA5P52803 228 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PHEXP78562 749 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SLC25A3Q00325 362 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PDE1BQ01064 536 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 MSLNQ13421 630 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CHI3L2Q15782 390 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CNGA3Q16281 694 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 C15orf59Q2T9L4 293 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 FAM102AQ5T9C2 384 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ZC3H7BQ9UGR2 993 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SIX4Q9UIU6 781 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 HTR3EA5X5Y0 456 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 H3BSA7 217 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 I3L4J1 428 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 BUD23O43709 281 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 KRT37O76014 449 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 TNNC2P02585 160 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 TFAP2AP05549 437 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 RAG1P15918 1043 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PTPRAP18433 802 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 GSTM4Q03013 218 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CDO1Q16878 200 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SHKBP1Q8TBC3 707 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ELOVL4Q9GZR5 314 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 RNF19AQ9NV58 838 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 FAIMQ9NVQ4 179 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CEP350Q5VT06 3117 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 B4GALT5O43286 388 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 TOP3BO95985 862 aaKnown RBP12.77□□□□□ -0.36
CCDC78-213ENST00000482878 GJB1P08034 283 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 TBL3Q12788 808 aaKnown RBP12.77□□□□□ -0.36
CCDC78-213ENST00000482878 TEX44Q53QW1 395 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 SLC15A3Q8IY34 581 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 LRRC43Q8N309 656 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 TRIML2Q8N7C3 387 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 UBA3Q8TBC4 463 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.36
CCDC78-213ENST00000482878 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 C7orf26Q96N11 449 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 BCO2Q9BYV7 579 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.36
CCDC78-213ENST00000482878 AS3MTQ9HBK9 375 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 ASNSD1Q9NWL6 643 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 TAGLN3Q9UI15 199 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 PPME1Q9Y570 386 aa12.77□□□□□ -0.36
CCDC78-213ENST00000482878 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 M0QYV0 167 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 ADCY6O43306 1168 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 GRAP2O75791 330 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 CSH1P0DML2 217 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 CSH2P0DML3 217 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 RBL1P28749 1068 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.37
CCDC78-213ENST00000482878 EMP3P54852 163 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 AQP5P55064 265 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
CCDC78-213ENST00000482878 SEPT6Q14141 434 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 SURF1Q15526 300 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 FBXL19Q6PCT2 694 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 TUT1Q9H6E5 874 aaKnown RBP12.77□□□□□ -0.37
CCDC78-213ENST00000482878 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 GPATCH2LQ9NWQ4 482 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 SIRPGQ9P1W8 387 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.37
CCDC78-213ENST00000482878 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 B4GALT4O60513 344 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 APRTP07741 180 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 CXCL8P10145 99 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 IL4RP24394 825 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 GPD2P43304 727 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 IRX4P78413 519 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 TRMT10BQ6PF06 316 aaKnown RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 METTL25Q8N6Q8 603 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 CASP10Q92851 521 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PAK5Q9P286 719 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 PLA2G4CQ9UP65 541 aa12.76□□□□□ -0.37
CCDC78-213ENST00000482878 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
CCDC78-213ENST00000482878 SIP14410 1827 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms