RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 A2ML1A8K2U0 1454 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 CDC42BPAQ5VT25 1732 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 PROB1E7EW31 1015 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ADAM10O14672 748 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 NCK2O43639 380 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 FGF18O76093 207 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ANXA2P07355 339 aaKnown RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 TSHRP16473 764 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 TACR3P29371 465 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 POLGP54098 1239 aaPredicted RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ID2Q02363 134 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ICA1Q05084 483 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 DEUP1Q05D60 604 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 STARD3Q14849 445 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 PFKFB3Q16875 520 aaPredicted RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ARL13BQ3SXY8 428 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 KLHDC7AQ5VTJ3 777 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 RRAGBQ5VZM2 374 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 SMAP1Q8IYB5 467 aaPredicted RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 CPXCR1Q8N123 301 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 TXLNBQ8N3L3 684 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ATP11CQ8NB49 1132 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 MBD3L2Q8NHZ7 208 aaPredicted RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF566Q969W8 418 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 KIAA1191Q96A73 305 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
GTF3A-207ENST00000482655 SLC25A32Q9H2D1 315 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 AS3MTQ9HBK9 375 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 MTMR4Q9NYA4 1195 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ASAP1Q9ULH1 1129 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 CAPN11Q9UMQ6 739 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 PREX2Q70Z35 1606 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 ARHGAP5Q13017 1502 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 MED14O60244 1454 aa4.3□□□□□ -1.72
GTF3A-207ENST00000482655 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 RNF17Q9BXT8 1623 aaKnown RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 INO80Q9ULG1 1556 aaPredicted RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 MYMKA6NI61 221 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 FYB1O15117 783 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 CA12O43570 354 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 TOM1O60784 492 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 NBNO60934 754 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 TMEM191BP0C7N4 346 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 HALP42357 657 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 GPC5P78333 572 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 MAPK7Q13164 816 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 SLC14A1Q13336 389 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 PMS2P11Q13670 270 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 SEC23BQ15437 767 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ELF2Q15723 593 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF260Q3ZCT1 412 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 HIBCHQ6NVY1 386 aaPredicted RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 TECPR1Q7Z6L1 1165 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF354CQ86Y25 554 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 C9orf106Q8NAJ2 232 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ZNF527Q8NB42 609 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 SPATA5Q8NB90 893 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 CCDC150Q8NCX0 1101 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 COQ8BQ96D53 544 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 TMEM41AQ96HV5 264 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 FAM227BQ96M60 508 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ADGRE3Q9BY15 652 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 WDR26Q9H7D7 661 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 ARL8BQ9NVJ2 186 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 VPS51Q9UID3 782 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 CDC23Q9UJX2 597 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 PCDHGB2Q9Y5G2 931 aa4.29□□□□□ -1.72
GTF3A-207ENST00000482655 MORC2Q9Y6X9 1032 aaPredicted RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 TROQ12816 1431 aaPredicted RBP4.29□□□□□ -1.72
GTF3A-207ENST00000482655 DEPDC5O75140 1603 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 LRP6O75581 1613 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.28□□□□□ -1.72
GTF3A-207ENST00000482655 A0A1W2PPC4 97 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 HNRNPDLO14979 420 aaKnown RBP4.28□□□□□ -1.72
GTF3A-207ENST00000482655 WDR47O94967 919 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 HARSP12081 509 aaKnown RBP4.28□□□□□ -1.72
GTF3A-207ENST00000482655 IDEP14735 1019 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 SCP2P22307 547 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 JAK3P52333 1124 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 DGKQP52824 942 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 COPAP53621 1224 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 RPS13P62277 151 aaKnown RBP4.28□□□□□ -1.72
GTF3A-207ENST00000482655 BIRC3Q13489 604 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 BLMHQ13867 455 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 SLC9C1Q4G0N8 1177 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 AWAT2Q6E213 333 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 ANKRD13BQ86YJ7 626 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
GTF3A-207ENST00000482655 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 FZD4Q9ULV1 537 aa4.28□□□□□ -1.72
GTF3A-207ENST00000482655 COL15A1P39059 1388 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms