RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CAMK4Q16566 473 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 MEA1Q16626 185 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 MPP7Q5T2T1 576 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 ADGRF1Q5T601 910 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 STPG1Q5TH74 334 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 EGFLAMQ63HQ2 1017 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 MSANTD2Q6P1R3 559 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 FMNL3Q8IVF7 1028 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 ARHGEF19Q8IW93 802 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 UNC45BQ8IWX7 931 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 IPO4Q8TEX9 1081 aaKnown RBP8.09□□□□□ -1.11
CCNC-204ENST00000482541 DDI1Q8WTU0 396 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 STK32AQ8WU08 396 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 EDEM1Q92611 657 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 GOLGA1Q92805 767 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 BHMTQ93088 406 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 AZIN2Q96A70 460 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 TMA16Q96EY4 203 aaKnown RBP8.09□□□□□ -1.11
CCNC-204ENST00000482541 PIWIL1Q96J94 861 aaKnown RBP8.09□□□□□ -1.11
CCNC-204ENST00000482541 UBE2TQ9NPD8 197 aaPredicted RBP8.09□□□□□ -1.11
CCNC-204ENST00000482541 RXFP3Q9NSD7 469 aa8.09□□□□□ -1.11
CCNC-204ENST00000482541 ABCA7Q8IZY2 2146 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 NUP205Q92621 2012 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 PLXND1Q9Y4D7 1925 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 GTPBP10A4D1E9 387 aaKnown RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 M0QYV0 167 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 LTFP02788 710 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 BRD2P25440 801 aaKnown RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 WASP42768 502 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 ACADSBP45954 432 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 GEN1Q17RS7 908 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 TRIM65Q6PJ69 517 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 BEND5Q7L4P6 421 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 CYP2U1Q7Z449 544 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 CREBRFQ8IUR6 639 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 SYT12Q8IV01 421 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 TMEFF1Q8IYR6 380 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 FRMD1Q8N878 549 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 ZNF606Q8WXB4 792 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 P2RY11Q96G91 374 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 MRGPRX1Q96LB2 322 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 KREMEN1Q96MU8 473 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 TRIM62Q9BVG3 475 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 LSM14BQ9BX40 385 aaKnown RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 INTS2Q9H0H0 1204 aaKnown RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 ELOVL2Q9NXB9 296 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 CALCOCO1Q9P1Z2 691 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 THAP10Q9P2Z0 257 aaPredicted RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 EVLQ9UI08 416 aaPredicted RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 MBD1Q9UIS9 605 aaPredicted RBP8.08□□□□□ -1.12
CCNC-204ENST00000482541 STON1Q9Y6Q2 735 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 SDK1Q7Z5N4 2213 aa8.08□□□□□ -1.12
CCNC-204ENST00000482541 WDR87Q6ZQQ6 2873 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 WASH3PC4AMC7 463 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 IRAK2O43187 625 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 IGLV3-27P01718 113 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 ADRB1P08588 477 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 KRT5P13647 590 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 HOXD12P35452 270 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 SLC11A2P49281 568 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 RGS7P49802 495 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 IRX4P78413 519 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 KCNC4Q03721 635 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 LMAN2Q12907 356 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 STARD3Q14849 445 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 PPM1JQ5JR12 505 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 GBP6Q6ZN66 633 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 ANKS1BQ7Z6G8 1248 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 ZNF557Q8N988 423 aaPredicted RBP8.07□□□□□ -1.12
CCNC-204ENST00000482541 ZNF511Q8NB15 262 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 PIGKQ92643 395 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 MED15Q96RN5 788 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 EDEM2Q9BV94 578 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 SMOC1Q9H4F8 434 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 CACNA2D2Q9NY47 1150 aa8.07□□□□□ -1.12
CCNC-204ENST00000482541 IGHV1OR15-9A0A0B4J2B8 117 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 LNP1A1A4G5 178 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 PIK3R2O00459 728 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 SYNCRIPO60506 623 aaKnown RBP8.06□□□□□ -1.12
CCNC-204ENST00000482541 LETM1O95202 739 aaPredicted RBP8.06□□□□□ -1.12
CCNC-204ENST00000482541 FYNP06241 537 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 NCAM1P13591 858 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 SLC9A1P19634 815 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 HOXD9P28356 352 aaPredicted RBP8.06□□□□□ -1.12
CCNC-204ENST00000482541 ERCC5P28715 1186 aaPredicted RBP8.06□□□□□ -1.12
CCNC-204ENST00000482541 PTGER3P43115 390 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 TBX4P57082 545 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
CCNC-204ENST00000482541 ARID5AQ03989 594 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 ZNF33AQ06730 810 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 NNTQ13423 1086 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 ZNF234Q14588 700 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 EXOC3L4Q17RC7 722 aa8.06□□□□□ -1.12
CCNC-204ENST00000482541 DAB2IPQ5VWQ8 1189 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms