RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
RXRA-202ENST00000481739 PIGVQ9NUD9 493 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 FBXW11Q9UKB1 542 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 CLUHO75153 1309 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 TMEM120BA0PK00 339 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 EEF2KO00418 725 aaKnown RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 OPHN1O60890 802 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 USP17L7P0C7H9 530 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 BRAFP15056 766 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 SYN1P17600 705 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 GLUD2P49448 558 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 SARNPP82979 210 aaKnown RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 NME3Q13232 169 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 DPYSQ14117 519 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 BBS9Q3SYG4 887 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 RFX8Q6ZV50 586 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 C16orf59Q7L2K0 433 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 MDM1Q8TC05 714 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 SGSM3Q96HU1 749 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 GPR62Q9BZJ7 368 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 MARCH5Q9NX47 278 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 NKIRAS1Q9NYS0 192 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.2
RXRA-202ENST00000481739 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
RXRA-202ENST00000481739 A0A0A0MRY4 1105 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 TCRBV7S3A2A0A539 114 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 RASA4BC9J798 803 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SYN3O14994 580 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 RASA4O43374 803 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 AMPD1P23109 780 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SEC24CP53992 1094 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 GPX6P59796 221 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SLC10A2Q12908 348 aaPredicted RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 SEMA3BQ13214 749 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SEMA5AQ13591 1074 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 FUT10Q6P4F1 479 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 C3orf62Q6ZUJ4 267 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 HFE2Q6ZVN8 426 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 GPRIN1Q7Z2K8 1008 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 TRABD2AQ86V40 505 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SPATA2LQ8IUW3 424 aaPredicted RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 DCP1BQ8IZD4 617 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 OR10T2Q8NGX3 314 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 HTR3CQ8WXA8 447 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 FUBP3Q96I24 572 aaKnown RBP eCLIP16.26■□□□□ 0.19
RXRA-202ENST00000481739 B3GALT6Q96L58 329 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 SPATA13Q96N96 652 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 TMEM209Q96SK2 561 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 YME1L1Q96TA2 773 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 CYTH2Q99418 400 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 NSRP1Q9H0G5 558 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 CWH43Q9H720 699 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 XAB2Q9HCS7 855 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 SSU72Q9NP77 194 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 EIF2B3Q9NR50 452 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 DDIT4Q9NX09 232 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 RABGEF1Q9UJ41 708 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 TEX264Q9Y6I9 313 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 MTSS1O43312 755 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 OAZ2O95190 189 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 BDNFP23560 247 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 GCAP28676 217 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 STX2P32856 288 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 HTR7P34969 479 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 CXCR3P49682 368 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 ELAVL2Q12926 359 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 PRKD1Q15139 912 aaPredicted RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 TMED2Q15363 201 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 MSS51Q4VC12 460 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 ANKMY2Q8IV38 441 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 ZNF317Q96PQ6 595 aaPredicted RBP16.26■□□□□ 0.19
RXRA-202ENST00000481739 EPAS1Q99814 870 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 DHRS4Q9BTZ2 278 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
RXRA-202ENST00000481739 DCLK1O15075 740 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 PRPF4O43172 522 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■■□ 20.6
RXRA-202ENST00000481739 MLNP12872 115 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 SERPINB6P35237 376 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 PITX1P78337 314 aaPredicted RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 NFE2Q16621 373 aaPredicted RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 GKAP1Q5VSY0 366 aaPredicted RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 FOXR1Q6PIV2 292 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 TMEM173Q86WV6 379 aaPredicted RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 SRRM1Q8IYB3 904 aaKnown RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 PYROXD2Q8N2H3 581 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 DYDC1Q8WWB3 177 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 ZNF689Q96CS4 500 aaPredicted RBP16.25■□□□□ 0.19
RXRA-202ENST00000481739 ETNK1Q9HBU6 452 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.196e-7■■■■□ 21.2
RXRA-202ENST00000481739 TBK1Q9UHD2 729 aa16.25■□□□□ 0.19
RXRA-202ENST00000481739 POC1B-GALNT4F8VUJ3 575 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms