RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ARTNQ5T4W7 220 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 ADGRF1Q5T601 910 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 PIK3R6Q5UE93 754 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 GRAMD4Q6IC98 578 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 SYNPOQ8N3V7 929 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 CCDC33Q8N5R6 958 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 EMC1Q8N766 993 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 NELL1Q92832 810 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 NT5C3BQ969T7 300 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 TBCBQ99426 244 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 NPY6RQ99463 290 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
PTPRF-213ENST00000481019 PIGVQ9NUD9 493 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 ABHD10Q9NUJ1 306 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 SEPT11Q9NVA2 429 aaKnown RBP12.7□□□□□ -0.38
PTPRF-213ENST00000481019 DDIT4Q9NX09 232 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 AIPL1Q9NZN9 384 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 DEC1Q9P2X7 70 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 FBXO4Q9UKT5 387 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 ZKSCAN5Q9Y2L8 839 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 SNX10Q9Y5X0 201 aa12.7□□□□□ -0.38
PTPRF-213ENST00000481019 FANCMQ8IYD8 2048 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 TCRBV5S1A1TA0A578 114 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.388e-13■■■■□ 20.4
PTPRF-213ENST00000481019 ADAM23O75077 832 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 LATS1O95835 1130 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 HNRNPH3P31942 346 aaKnown RBP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 NOS2P35228 1153 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 TIE1P35590 1138 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 CHKAP35790 457 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 MATKP42679 507 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 CXCL12P48061 93 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 IRAK1P51617 712 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 RPS24P62847 133 aaKnown RBP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 NME3Q13232 169 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 NNTQ13423 1086 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 GEN1Q17RS7 908 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 SH3PXD2AQ5TCZ1 1133 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 EGFLAMQ63HQ2 1017 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 RAP1GAP2Q684P5 730 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 NUGGCQ68CJ6 796 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 RNF43Q68DV7 783 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 TRIM72Q6ZMU5 477 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 MON1BQ7L1V2 547 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 BNIPLQ7Z465 357 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 VPS36Q86VN1 386 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 PHF13Q86YI8 300 aaPredicted RBP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 UNC45BQ8IWX7 931 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 CCDC170Q8IYT3 715 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 DDI1Q8WTU0 396 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 ERLEC1Q96DZ1 483 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 CFAP57Q96MR6 1250 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 ACOX2Q99424 681 aa12.69□□□□□ -0.38
PTPRF-213ENST00000481019 PRMT1Q99873 361 aaKnown RBP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 LUC7LQ9NQ29 371 aaKnown RBP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTPRF-213ENST00000481019 TBC1D3BA6NDS4 549 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TMCO5BA8MYB1 307 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 M0QYT0 321 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 SGK1O00141 431 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TBL1XO60907 577 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 PAPSS2O95340 614 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 KLF8O95600 359 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 SCNN1AP37088 669 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 PLA2G5P39877 138 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 PRKCIP41743 596 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 WASP42768 502 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 SLC11A2P49281 568 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 FNTBP49356 437 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 DGKGP49619 791 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 SULT1E1P49888 294 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 CCR3P51677 355 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 FBXO43Q4G163 708 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 C14orf80Q86SX3 495 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 CIR1Q86X95 450 aaPredicted RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 CFAP52Q8N1V2 620 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TXNDC5Q8NBS9 432 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms