RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 SETD7Q8WTS6 366 aaKnown RBP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 PRCCQ92733 491 aaPredicted RBP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 SNX21Q969T3 373 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 BIRC7Q96CA5 298 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 NUP58Q9BVL2 599 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 CCDC86Q9H6F5 360 aaKnown RBP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 TM9SF3Q9HD45 589 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 PRSS16Q9NQE7 514 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 SERGEFQ9UGK8 458 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 STOML2Q9UJZ1 356 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 ZNF510Q9Y2H8 683 aa9.72□□□□□ -0.85
GTF3C2-210ENST00000480989 MGAQ8IWI9 3026 aa9.71□□□□□ -0.85
GTF3C2-210ENST00000480989 GOLGA6L7A0A1B0GV03 622 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 H0Y8X5 98 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CBX4O00257 560 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 WNT9AO14904 365 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 NPC1O15118 1278 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CALUO43852 315 aaPredicted RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 SYNCRIPO60506 623 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CER1O95813 267 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ZBED1O96006 694 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 IGLV3-27P01718 113 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 WNT1P04628 370 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CMA1P23946 247 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 SLC6A4P31645 630 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CD70P32970 193 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CTSKP43235 329 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 NDUFA8P51970 172 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ZNF132P52740 706 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 RPS14P62263 151 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 IL9RQ01113 521 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ENPEPQ07075 957 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ADIGQ0VDE8 80 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 SHBQ15464 509 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 FAM133BQ5BKY9 247 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 NADSYN1Q6IA69 706 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 SERPINA13PQ6UXR4 307 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CHST9Q7L1S5 443 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ANKRD52Q8NB46 1076 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 CLEC4CQ8WTT0 213 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 DDI1Q8WTU0 396 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 HNRNPLLQ8WVV9 542 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 EDEM1Q92611 657 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 PLD4Q96BZ4 506 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 HEXIM2Q96MH2 286 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 PRICKLE1Q96MT3 831 aaPredicted RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 SLC2A11Q9BYW1 496 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 UBXN6Q9BZV1 441 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ABCB8Q9NUT2 735 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 TSPAN16Q9UKR8 245 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 INTS6Q9UL03 887 aaKnown RBP9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 PCDHGB2Q9Y5G2 931 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 ATMQ13315 3056 aa9.71□□□□□ -0.86
GTF3C2-210ENST00000480989 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 XPO1O14980 1071 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 FLRT2O43155 660 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 PABPC1P11940 636 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 OXTRP30559 389 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 MXI1P50539 228 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 PMS1P54277 932 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 KCNJ12Q14500 433 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 PRAMEF14Q5SWL7 426 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 KRT39Q6A163 491 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 TADA2BQ86TJ2 420 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 GUF1Q8N442 669 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 UBA3Q8TBC4 463 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 RHBDD1Q8TEB9 315 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 UCMAQ8WVF2 138 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 TFAP2BQ92481 460 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 SNX19Q92543 992 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 MRGPRX3Q96LB0 322 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 IMPG2Q9BZV3 1241 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 RAB20Q9NX57 234 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 DKK4Q9UBT3 224 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 GGA2Q9UJY4 613 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 APOBEC2Q9Y235 224 aaKnown RBP9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 ANKRD6Q9Y2G4 727 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 PTPRQQ9UMZ3 2332 aa9.7□□□□□ -0.86
GTF3C2-210ENST00000480989 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 O00370 1275 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 PIK3R2O00459 728 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 SEMA4FO95754 770 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 FYNP06241 537 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 RDXP35241 583 aaKnown RBP9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 PSMC2P35998 433 aaKnown RBP9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 GRIA4P48058 902 aa9.69□□□□□ -0.86
GTF3C2-210ENST00000480989 KNTC1P50748 2209 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms