RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CLEC4CQ8WTT0 213 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZNF560Q96MR9 790 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 GPAMQ9HCL2 828 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 SCN1AP35498 2009 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 PLIN3O60664 434 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 KLHL2O95198 593 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 THOC5Q13769 683 aaKnown RBP25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 PDK1Q15118 436 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 GJC2Q5T442 439 aaPredicted RBP25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 NOTUMQ6P988 496 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 C7orf31Q8N865 590 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 NRG4Q8WWG1 115 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 FAM161BQ96MY7 647 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 RILPQ96NA2 401 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 TRIM56Q9BRZ2 755 aaKnown RBP25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 C20orf27Q9GZN8 174 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 ADAMTS10Q9H324 1103 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 DPEP3Q9H4B8 488 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 XPNPEP3Q9NQH7 507 aa25.34■■□□□ 1.65
SYNGAP1-206ENST00000479510 PIRO00625 290 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 ALDOAP04075 364 aaKnown RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 SERPINE1P05121 402 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 LCP1P13796 627 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 GOT1P17174 413 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 GNL1P36915 607 aaPredicted RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 ATXN1P54253 815 aaKnown RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 CCNA1P78396 465 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 FBXO47Q5MNV8 452 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 LIMS2Q7Z4I7 341 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 LRRN4Q8WUT4 740 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 KBTBD7Q8WVZ9 684 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 SCG3Q8WXD2 468 aaKnown RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 EMCNQ9ULC0 261 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 RRN3P2A6NIE6 340 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 DAB1O75553 588 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 FGF3P11487 239 aaPredicted RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 ACTR3P61158 418 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 FRG1Q14331 258 aaKnown RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 TEDDM1Q5T9Z0 273 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 N4BP2L1Q5TBK1 243 aaPredicted RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 CASC4Q6P4E1 433 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 SNX25Q9H3E2 840 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZNF395Q9H8N7 513 aaPredicted RBP25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 IGSF9Q9P2J2 1179 aa25.33■■□□□ 1.65
SYNGAP1-206ENST00000479510 XPO1O14980 1071 aaKnown RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 MAP3K7O43318 606 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 CCDC130P13994 396 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 ADORA2BP29275 332 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 CDC25CP30307 473 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 SESN3P58005 492 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 PDE1CQ14123 709 aaPredicted RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 FAM182AQ5T1J6 154 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 ARNTL2Q8WYA1 636 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 ADAM28Q9UKQ2 775 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 RNF103O00237 685 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 XPOTO43592 962 aaKnown RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 KITP10721 976 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 GARSP41250 739 aaKnown RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 SLC1A6P48664 564 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 CATSPER4Q7RTX7 472 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 ULK2Q8IYT8 1036 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 C18orf25Q96B23 403 aaPredicted RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 TNIP3Q96KP6 325 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 SGIP1Q9BQI5 828 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 KATNBL1Q9H079 304 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 DNAJC28Q9NX36 388 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 MARCOQ9UEW3 520 aaPredicted RBP25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 RAD54BQ9Y620 910 aa25.32■■□□□ 1.64
SYNGAP1-206ENST00000479510 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 UNCXA6NJT0 531 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 TPP1O14773 563 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 ITGA2BP08514 1039 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 ALOX15P16050 662 aaPredicted RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 ALDH18A1P54886 795 aaKnown RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 TUBB3Q13509 450 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 RCN2Q14257 317 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 PAFAH1B3Q15102 231 aaKnown RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 SPANXN3Q5MJ09 141 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 BNIPLQ7Z465 357 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 MYLK4Q86YV6 388 aaPredicted RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 PPP4R1Q8TF05 950 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 NT5C3BQ969T7 300 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 ISL2Q96A47 359 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 P2RY11Q96G91 374 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 CXCL16Q9H2A7 254 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 VCXQ9H320 206 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 SOX13Q9UN79 622 aa25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 APOBEC2Q9Y235 224 aaKnown RBP25.31■■□□□ 1.64
SYNGAP1-206ENST00000479510 MFSD11O43934 449 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 POLBP06746 335 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 CPA2P48052 419 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 KDSRQ06136 332 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 RABGAP1LQ5R372 815 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 RNF139Q8WU17 664 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 OPTNQ96CV9 577 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 LGMNQ99538 433 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 CPNE1Q99829 537 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 DNAJC16Q9Y2G8 782 aa25.3■■□□□ 1.64
SYNGAP1-206ENST00000479510 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms