RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CYP3A43Q9HB55 503 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 SLC39A2Q9NP94 309 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 GGA2Q9UJY4 613 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 SCML1Q9UN30 329 aa16.82■□□□□ 0.28
DDX56-210ENST00000479440 A0A1W2PPC4 97 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 IGHV4-34P06331 123 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 ATP5BP06576 529 aaKnown RBP16.81■□□□□ 0.28
DDX56-210ENST00000479440 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
DDX56-210ENST00000479440 HARS2P49590 506 aaKnown RBP16.81■□□□□ 0.28
DDX56-210ENST00000479440 CLDN6P56747 220 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 TARDBPQ13148 414 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDX56-210ENST00000479440 DNAJC3Q13217 504 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 USP30Q70CQ3 517 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDX56-210ENST00000479440 ARID3AQ99856 593 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 ORAI3Q9BRQ5 295 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 BACH2Q9BYV9 841 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 PRSS16Q9NQE7 514 aa16.81■□□□□ 0.28
DDX56-210ENST00000479440 OLA1Q9NTK5 396 aaKnown RBP16.81■□□□□ 0.28
DDX56-210ENST00000479440 J3QKU1 62 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 CBX4O00257 560 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 DLDP09622 509 aaKnown RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 PABPC1P11940 636 aaKnown RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 ACTN2P35609 894 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 YWHAGP61981 247 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX56-210ENST00000479440 DLG4P78352 724 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 CFHR1Q03591 330 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 ILKQ13418 452 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 TRIP4Q15650 581 aaPredicted RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 FBXL19Q6PCT2 694 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 SV2AQ7L0J3 742 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 SLC9A9Q8IVB4 645 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 OXR1Q8N573 874 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 ZNF557Q8N988 423 aaPredicted RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 GANCQ8TET4 914 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 FGF11Q92914 225 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 NIF3L1Q9GZT8 377 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 PABPC3Q9H361 631 aaKnown RBP16.8■□□□□ 0.28
DDX56-210ENST00000479440 GDF3Q9NR23 364 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 AASDHPPTQ9NRN7 309 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 ABCB8Q9NUT2 735 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 SUN2Q9UH99 717 aa16.8■□□□□ 0.28
DDX56-210ENST00000479440 HELZ2Q9BYK8 2649 aaKnown RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 PVALEFA0A1B0GWK0 134 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 FAM47DPA6NHR8 397 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 LRRC72A6NJI9 287 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 ERVH48-1M5A8F1 160 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 RNASEH1O60930 286 aaKnown RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 LATS1O95835 1130 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 CD58P19256 250 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 EPHA8P29322 1005 aaPredicted RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 SLC8A3P57103 927 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 EID2Q8N6I1 236 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 SAP25Q8TEE9 199 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 TMEM174Q8WUU8 243 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 TMEM176AQ96HP8 235 aa16.79■□□□□ 0.28
DDX56-210ENST00000479440 ZSCAN16Q9H4T2 348 aaPredicted RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 TPX2Q9ULW0 747 aaKnown RBP16.79■□□□□ 0.28
DDX56-210ENST00000479440 IKBKBO14920 756 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 SPTLC2O15270 562 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 BRINP1O60477 761 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 PPP6R2O75170 966 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 POLR2EP19388 210 aaKnown RBP16.78■□□□□ 0.28
DDX56-210ENST00000479440 SYT1P21579 422 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 CD38P28907 300 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 CXADRP78310 365 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 TLE3Q04726 772 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 CUL4AQ13619 759 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 SLC45A4Q5BKX6 768 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 MBLAC2Q68D91 279 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 LINC00301Q8NCQ3 95 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 RSPH9Q9H1X1 276 aaPredicted RBP16.78■□□□□ 0.28
DDX56-210ENST00000479440 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 DMAC2Q9NW81 257 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 FBXL12Q9NXK8 326 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 FRMD4BQ9Y2L6 1034 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 HBS1LQ9Y450 684 aaKnown RBP16.78■□□□□ 0.28
DDX56-210ENST00000479440 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
DDX56-210ENST00000479440 TP53BP1Q12888 1972 aaPredicted RBP16.77■□□□□ 0.28
DDX56-210ENST00000479440 SHROOM3Q8TF72 1996 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 SLFN14P0C7P3 912 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 GALCP54803 685 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 SHBQ15464 509 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 TBC1D25Q3MII6 688 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 TAF1BQ53T94 588 aaPredicted RBP16.77■□□□□ 0.28
DDX56-210ENST00000479440 RAB41Q5JT25 222 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 NCEH1Q6PIU2 408 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
DDX56-210ENST00000479440 FMNL3Q8IVF7 1028 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 CACTIN-AS1Q8N1I8 211 aa16.77■□□□□ 0.28
DDX56-210ENST00000479440 OR2T34Q8NGX1 318 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms