RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
GARNL3-215ENST00000478702 GTPBP2Q9BX10 602 aaKnown RBP16.47■□□□□ 0.23
GARNL3-215ENST00000478702 CD93Q9NPY3 652 aa16.47■□□□□ 0.23
GARNL3-215ENST00000478702 MARK1Q9P0L2 795 aa16.47■□□□□ 0.23
GARNL3-215ENST00000478702 FAM221BA6H8Z2 402 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 TAF4O00268 1085 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 PIK3R2O00459 728 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 CAPNS1P04632 268 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 SERPINF2P08697 491 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 PNMA6AP0CW24 399 aaPredicted RBP16.46■□□□□ 0.23
GARNL3-215ENST00000478702 CD59P13987 128 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 HOXB2P14652 356 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 USP8P40818 1118 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 TYRO3Q06418 890 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 EGFLAMQ63HQ2 1017 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 CEP76Q8TAP6 659 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 CLEC4CQ8WTT0 213 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 STK32AQ8WU08 396 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 EDEM1Q92611 657 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 PLD4Q96BZ4 506 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 ACOX2Q99424 681 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 SLC4A5Q9BY07 1137 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 DCLK3Q9C098 648 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 ABCC13Q9NSE7 274 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 FANCLQ9NW38 375 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 DEC1Q9P2X7 70 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 CYTH4Q9UIA0 394 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 ZNF510Q9Y2H8 683 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 FHOD1Q9Y613 1164 aa16.46■□□□□ 0.23
GARNL3-215ENST00000478702 NBEAQ8NFP9 2946 aa16.46■□□□□ 0.22
GARNL3-215ENST00000478702 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 CACNG3O60359 315 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 LTFP02788 710 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 KLKB1P03952 638 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 HMBSP08397 361 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 NTSR1P30989 418 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 CORO1AP31146 461 aaKnown RBP16.45■□□□□ 0.22
GARNL3-215ENST00000478702 ACADSBP45954 432 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 GFPT1Q06210 699 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-215ENST00000478702 NCAPHQ15003 741 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 ANO4Q32M45 955 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 KLHDC7AQ5VTJ3 777 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 LRSAM1Q6UWE0 723 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 SLC36A4Q6YBV0 504 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 TRMT11Q7Z4G4 463 aaKnown RBP16.45■□□□□ 0.22
GARNL3-215ENST00000478702 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 FAM71AQ8IYT1 594 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 HDDC3Q8N4P3 179 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 CHCHD4Q8N4Q1 142 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 MINDY1Q8N5J2 469 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 RNF139Q8WU17 664 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 ERLEC1Q96DZ1 483 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
GARNL3-215ENST00000478702 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
GARNL3-215ENST00000478702 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
GARNL3-215ENST00000478702 FREM2Q5SZK8 3169 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 MUC22E2RYF6 1773 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 NEDD8-MDP1E9PL57 170 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 FOXN3O00409 490 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 ARHGAP33O14559 1287 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 SART1O43290 800 aaKnown RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 OPHN1O60890 802 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 GJB3O75712 270 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 TPM2P07951 284 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 UCHL3P15374 230 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 ZNF18P17022 549 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 NDUFV2P19404 249 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 CLCN1P35523 988 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 ATXN3P54252 364 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 PTK2Q05397 1052 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 PDCLQ13371 301 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 RAPGEF1Q13905 1077 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 TRIP4Q15650 581 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 RAB44Q7Z6P3 723 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 FAM217AQ8IXS0 508 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 IPO4Q8TEX9 1081 aaKnown RBP16.44■□□□□ 0.22
GARNL3-215ENST00000478702 GOLGA1Q92805 767 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 BBS2Q9BXC9 721 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 MIS12Q9H081 205 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 VPS16Q9H269 839 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 GANQ9H2C0 597 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 HSD3B7Q9H2F3 369 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
GARNL3-215ENST00000478702 ITPR1Q14643 2758 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 PRRT4C9JH25 899 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 E5RJQ4 531 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 MSI1O43347 362 aaKnown RBP16.43■□□□□ 0.22
GARNL3-215ENST00000478702 TYRP14679 529 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
GARNL3-215ENST00000478702 DRAP1Q14919 205 aaPredicted RBP16.43■□□□□ 0.22
GARNL3-215ENST00000478702 TPGS1Q6ZTW0 290 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 TOGARAM2Q6ZUX3 1019 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 TMEM110Q86TL2 294 aa16.43■□□□□ 0.22
GARNL3-215ENST00000478702 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms