RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ENDOD1O94919 500 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 IGLV3-25P01717 112 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 IRF1P10914 325 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 MBL2P11226 248 aaPredicted RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 CEBPBP17676 345 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 IL1R2P27930 398 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 PCK1P35558 622 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TBX4P57082 545 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SLC25A11Q02978 314 aaKnown RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 RPS6KA1Q15418 735 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 HADHQ16836 314 aaKnown RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SMTNL2Q2TAL5 461 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 ATP13A4Q4VNC1 1196 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 ZC3H12AQ5D1E8 599 aaKnown RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 PRSS36Q5K4E3 855 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TXNRD3NBQ6F5E7 133 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 BNIPLQ7Z465 357 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 GPR149Q86SP6 731 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 RHOT1Q8IXI2 618 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 CCDC185Q8N715 623 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 UBL4BQ8N7F7 174 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 LEMD2Q8NC56 503 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TTC16Q8NEE8 873 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 ITFG1Q8TB96 612 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 HSPH1Q92598 858 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 CD101Q93033 1021 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 PGAP3Q96FM1 320 aaPredicted RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SERPINB11Q96P15 392 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TLR10Q9BXR5 811 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 RNF38Q9H0F5 515 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SLITRK6Q9H5Y7 841 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 WDR6Q9NNW5 1121 aaKnown RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 FBXL21Q9UKT6 434 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 MRPS23Q9Y3D9 190 aaKnown RBP12.14□□□□□ -0.47
PDCD11-204ENST00000478543 JRKLQ9Y4A0 524 aa12.14□□□□□ -0.47
PDCD11-204ENST00000478543 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 ZNF197O14709 1029 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 DDX3YO15523 660 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 PSTPIP1O43586 416 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 F9P00740 461 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 KRT1P04264 644 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CKMP06732 381 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 HDCP19113 662 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CTNNA2P26232 953 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CTNNA1P35221 906 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CXCR3P49682 368 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 TUBP50607 506 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 TRIP4Q15650 581 aaPredicted RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 ST3GAL2Q16842 350 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 KCNT1Q5JUK3 1230 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 DNTTIP2Q5QJE6 756 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 ATAT1Q5SQI0 421 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 HES6Q96HZ4 224 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 SNRNP25Q9BV90 132 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 SLC46A2Q9BY10 475 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 SMG9Q9H0W8 520 aaKnown RBP12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CA14Q9ULX7 337 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 ANAPC1Q9H1A4 1944 aa12.13□□□□□ -0.47
PDCD11-204ENST00000478543 CLUHO75153 1309 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 KCNK3O14649 394 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 PAPLNO95428 1278 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 KRT7P08729 469 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 RARAP10276 462 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 FSHRP23945 695 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 CA9Q16790 459 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 KLHDC10Q6PID8 442 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 CYP4V2Q6ZWL3 525 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 ST13P5Q8NFI4 369 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 ALG3Q92685 438 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 FCRL2Q96LA5 508 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 MAGEB5Q9BZ81 275 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 TKTL2Q9H0I9 626 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 WDCPQ9H6R7 721 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 TBC1D17Q9HA65 648 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 GKN1Q9NS71 199 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 FZD10Q9ULW2 581 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 AP4E1Q9UPM8 1137 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 TLR6Q9Y2C9 796 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 HBS1LQ9Y450 684 aaKnown RBP12.12□□□□□ -0.47
PDCD11-204ENST00000478543 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms