RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ARL2P36404 184 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 TUFMP49411 452 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 ITGA9Q13797 1035 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 CNGA3Q16281 694 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 NBPF20Q3BBV1 942 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 DUPD1Q68J44 220 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 POLNQ7Z5Q5 900 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 JOSD2Q8TAC2 188 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 CLPBQ9H078 707 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 PRDM12Q9H4Q4 367 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 ABCC13Q9NSE7 274 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 UTP6Q9NYH9 597 aaKnown RBP14.58□□□□□ -0.08
NPHP4-208ENST00000478423 WWOXQ9NZC7 414 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 CTNNAL1Q9UBT7 734 aa14.58□□□□□ -0.08
NPHP4-208ENST00000478423 NCF1BA6NI72 391 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NCF1CA8MVU1 366 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 MSCO60682 206 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NCF1P14598 390 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 CD151P48509 253 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NOGQ13253 232 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 UGT3A1Q6NUS8 523 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 SNX31Q8N9S9 440 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 C18orf25Q96B23 403 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 SRPK1Q96SB4 655 aaKnown RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 VAT1Q99536 393 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 ADGRE3Q9BY15 652 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 GOLGA2P5Q9HBQ8 144 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 SALL4Q9UJQ4 1053 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 RNF112Q9ULX5 631 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 SNED1Q8TER0 1413 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 C4BPAP04003 597 aaKnown RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NUDT2P50583 147 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 INPP5AQ14642 412 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 N4BP2L1Q5TBK1 243 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 KCNMB4Q86W47 210 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NMRK2Q9NPI5 230 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 CDH9Q9ULB4 789 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 TMEM191CA6NGB0 347 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 CLDN5O00501 218 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 ITGALP20701 1170 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 JAG1P78504 1218 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 ZNF470Q6ECI4 717 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 EFL1Q7Z2Z2 1120 aaKnown RBP14.57□□□□□ -0.08
NPHP4-208ENST00000478423 LGI2Q8N0V4 545 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 EME1Q96AY2 570 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 CCDC90BQ9GZT6 254 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 NRDE2Q9H7Z3 1164 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 ETNK2Q9NVF9 386 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 DMAC2Q9NW81 257 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 ARHGAP26Q9UNA1 814 aa14.57□□□□□ -0.08
NPHP4-208ENST00000478423 hCG_1818297A0A087WSY0 165 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 GPR25O00155 361 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 MMP3P08254 477 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 CCND1P24385 295 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SEL1L3Q68CR1 1132 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 LRRC39Q96DD0 335 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SENP6Q9GZR1 1112 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 A0A096LPK6 155 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 A0A0A0MRY4 1105 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 AKAP10O43572 662 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SHBGP04278 402 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 RBP1P09455 135 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SCTRP47872 440 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 STX5Q13190 355 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 TSHZ1Q6ZSZ6 1077 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 DAW1Q8N136 415 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 PWWP2AQ96N64 755 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SPATA13Q96N96 652 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 CDK5RAP1Q96SZ6 601 aaKnown RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SYTL2Q9HCH5 934 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 WRAP73Q9P2S5 460 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 ZNF135P52742 658 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 KCNK10P57789 538 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 DDX39BQ13838 428 aaKnown RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 DEFB115Q30KQ5 88 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 LPCAT1Q8NF37 534 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 B3GNT5Q9BYG0 378 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 KIF13AQ9H1H9 1805 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SMIM28A0A1B0GU29 152 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 SYNDIG1LA6NDD5 238 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 ERI2A8K979 691 aaKnown RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 PIAS1O75925 651 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 TRIM16O95361 564 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 MT-CO1P00395 513 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 PGAM1P18669 254 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 ADRA1DP25100 572 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 NPY2RP49146 381 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 CYB5D1Q6P9G0 228 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 ITIH5Q86UX2 942 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 C1orf127Q8N9H9 656 aa14.56□□□□□ -0.08
NPHP4-208ENST00000478423 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
NPHP4-208ENST00000478423 PRR23AA6NEV1 266 aa14.55□□□□□ -0.08
NPHP4-208ENST00000478423 SYCE1LA8MT33 242 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms