RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SLC35F5Q8WV83 523 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 ERCC4Q92889 916 aaPredicted RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 AZIN2Q96A70 460 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 ERLEC1Q96DZ1 483 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 GPR174Q9BXC1 333 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 MKRN2Q9H000 416 aaKnown RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 LHX5Q9H2C1 402 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 ABCB8Q9NUT2 735 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 DNAAF2Q9NVR5 837 aaKnown RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 CACNA1BQ00975 2339 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 MYH10P35580 1976 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 PLXND1Q9Y4D7 1925 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 MSI1O43347 362 aaKnown RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 TSPAN3O60637 253 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 CER1O95813 267 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 APOEP02649 317 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 PROS1P07225 676 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 DLDP09622 509 aaKnown RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 KRT5P13647 590 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 POLR2EP19388 210 aaKnown RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 BRD2P25440 801 aaKnown RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 MARSP56192 900 aaKnown RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 CAMK2GQ13555 558 aaPredicted RBP15.03■□□□□ -0
SMARCE1-209ENST00000478349 ZNF423Q2M1K9 1284 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 PMF1Q6P1K2 205 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 UNQ6494/PRO21346Q6UXR6 183 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 PIP4P1Q86T03 277 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 MFN1Q8IWA4 741 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 DNASE2BQ8WZ79 361 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 TFAP2BQ92481 460 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 ADAM33Q9BZ11 813 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 SLC6A17Q9H1V8 727 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 ST7Q9NRC1 585 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 PCDHB9Q9Y5E1 797 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 THADAQ6YHU6 1953 aa15.03■□□□□ -0
SMARCE1-209ENST00000478349 CAPN9O14815 690 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 ACSL4O60488 711 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 RNASEH1O60930 286 aaKnown RBP15.02■□□□□ -0
SMARCE1-209ENST00000478349 MOCS3O95396 460 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 IGLV3-27P01718 113 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 DNTTP04053 509 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 ASLP04424 464 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 PRKCHP24723 683 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 HLA-FP30511 346 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 KCNH2Q12809 1159 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 CDH18Q13634 790 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 MORC3Q14149 939 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 SMYD5Q6GMV2 418 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 ISM2Q6H9L7 571 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 BEND5Q7L4P6 421 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 TRIM59Q8IWR1 403 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 EHBP1Q8NDI1 1231 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 STK32AQ8WU08 396 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 NDRG1Q92597 394 aaKnown RBP15.02■□□□□ -0
SMARCE1-209ENST00000478349 INTS2Q9H0H0 1204 aaKnown RBP15.02■□□□□ -0
SMARCE1-209ENST00000478349 MIR1-1HGQ9H1L0 117 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 SUN2Q9UH99 717 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 SCML1Q9UN30 329 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 TLR6Q9Y2C9 796 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 NEUROG3Q9Y4Z2 214 aa15.02■□□□□ -0
SMARCE1-209ENST00000478349 CEP295Q9C0D2 2601 aa15.02□□□□□ -0.01
SMARCE1-209ENST00000478349 ABCA7Q8IZY2 2146 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 METTL12A8MUP2 240 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 BCAT2O15382 392 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 TBL1XO60907 577 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 COPAP53621 1224 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 SNX16P57768 344 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 MTA1Q13330 715 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 TEAD4Q15561 434 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 PIK3R6Q5UE93 754 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 DCAF12L1Q5VU92 463 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 MBLAC2Q68D91 279 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 ZNF776Q68DI1 518 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 RRAGAQ7L523 313 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 ZCCHC9Q8N567 271 aaKnown RBP15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 SORCS1Q8WY21 1168 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 SNX19Q92543 992 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 MED15Q96RN5 788 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 MIS12Q9H081 205 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 TMEM245Q9H330 911 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 TJP2Q9UDY2 1190 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 SLC12A6Q9UHW9 1150 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 NCKAP1Q9Y2A7 1128 aa15.01□□□□□ -0.01
SMARCE1-209ENST00000478349 NUP205Q92621 2012 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 PPP1R3GB7ZBB8 358 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 BIN1O00499 593 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 AFF3P51826 1226 aaKnown RBP15□□□□□ -0.01
SMARCE1-209ENST00000478349 GRIK2Q13002 908 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 RNF219Q5W0B1 726 aaPredicted RBP15□□□□□ -0.01
SMARCE1-209ENST00000478349 KIAA0907Q7Z7F0 614 aaPredicted RBP15□□□□□ -0.01
SMARCE1-209ENST00000478349 CACUL1Q86Y37 369 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 KDM1BQ8NB78 822 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 LMO3Q8TAP4 145 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 DQX1Q8TE96 717 aaKnown RBP15□□□□□ -0.01
SMARCE1-209ENST00000478349 P2RY11Q96G91 374 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 NOX5Q96PH1 765 aa15□□□□□ -0.01
SMARCE1-209ENST00000478349 SCNM1Q9BWG6 230 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms