RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 VSTM1Q6UX27 236 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 MFSD7Q6UXD7 560 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 GADL1Q6ZQY3 521 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TSHZ1Q6ZSZ6 1077 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CENPUQ71F23 418 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TRPM8Q7Z2W7 1104 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ANKS1BQ7Z6G8 1248 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 THNSL1Q8IYQ7 743 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 GBP7Q8N8V2 638 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 FNIP1Q8TF40 1166 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 GRAMD1AQ96CP6 724 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SGSM3Q96HU1 749 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 MAGEB18Q96M61 343 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 MCEEQ96PE7 176 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 RBM15Q96T37 977 aaKnown RBP eCLIP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CDX2Q99626 313 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 GPR20Q99678 358 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ELAC2Q9BQ52 826 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 MTMR12Q9C0I1 747 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SPATC1LQ9H0A9 340 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 LHX5Q9H2C1 402 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ATXN3LQ9H3M9 355 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 FZD8Q9H461 694 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 FAM124BQ9H5Z6 455 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SAYSD1Q9NPB0 183 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 KCNK9Q9NPC2 374 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 KLC4Q9NSK0 619 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 EURLQ9NYK6 297 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 BTBD7Q9P203 1132 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 FETUBQ9UGM5 382 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 DNPEPQ9ULA0 475 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TPX2Q9ULW0 747 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 NAALADL1Q9UQQ1 740 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF148Q9UQR1 794 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 USP15Q9Y4E8 981 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CSADQ9Y600 493 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 A0A0G2JLL6 359 aaPredicted RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 EXOC1LA0A1B0GW35 172 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 LRRD1A4D1F6 860 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 FAM47DPA6NHR8 397 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TCP11X1B4DZS4 312 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 F8VP50 259 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PI4K2BG5E9Z4 385 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CXCL11O14625 94 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CHUKO15111 745 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ALOX15BO15296 676 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PRPF4O43172 522 aaKnown RBP eCLIP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 GJB6O95452 261 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 WEE2P0C1S8 567 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 C1QTNF9P0C862 333 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SRGAP2CP0DJJ0 459 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 KRT10P13645 584 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 P4HA1P13674 534 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CD19P15391 556 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TSHRP16473 764 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PSMA2P25787 234 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ATICP31939 592 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PHBP35232 272 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CDKN2BP42772 138 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 MNAT1P51948 309 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 GTF2A1P52655 376 aaPredicted RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 FCGRTP55899 365 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 IL9RQ01113 521 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 OGDHQ02218 1023 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PPARDQ03181 441 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ZP2Q05996 745 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 POU5F1BQ06416 359 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 GPS1Q13098 491 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 IKZF1Q13422 519 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 VGLL4Q14135 290 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF268Q14587 947 aaPredicted RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TMED2Q15363 201 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SNCBQ16143 134 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TAZQ16635 292 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC142Q17RM4 750 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SEZ6Q53EL9 994 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF484Q5JVG2 852 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CELF3Q5SZQ8 465 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 RNASEH2BQ5TBB1 312 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 DAB2IPQ5VWQ8 1189 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 KAZNQ674X7 775 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 NUGGCQ68CJ6 796 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 DENND1BQ6P3S1 775 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PRR23BQ6ZRT6 265 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 BBS12Q6ZW61 710 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ERMP1Q7Z2K6 904 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SPATA21Q7Z572 469 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PRRT2Q7Z6L0 340 aaPredicted RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 FUKQ8N0W3 1084 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TTC39CQ8N584 583 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 WDTC1Q8N5D0 677 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ANKRD42Q8N9B4 389 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC63Q8NA47 563 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 RNF149Q8NC42 400 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SLC35B2Q8TB61 432 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms