RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GOLGA6L7A0A1B0GV03 622 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 GRID2IPA4D2P6 1211 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 BUB1O43683 1085 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 CYP17A1P05093 508 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 SRFP11831 508 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 AIF1P55008 147 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 VCPP55072 806 aaKnown RBP20.66■□□□□ 0.9
ACTB-210ENST00000477812 GAB4Q2WGN9 574 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 TXNRD3NBQ6F5E7 133 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 RHBDF2Q6PJF5 856 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 ATP2A3Q93084 1043 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 CALR3Q96L12 384 aaKnown RBP20.66■□□□□ 0.9
ACTB-210ENST00000477812 PRICKLE1Q96MT3 831 aaPredicted RBP20.66■□□□□ 0.9
ACTB-210ENST00000477812 GOLPH3Q9H4A6 298 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 BRD9Q9H8M2 597 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 FZD10Q9ULW2 581 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 USP18Q9UMW8 372 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 SNX10Q9Y5X0 201 aa20.66■□□□□ 0.9
ACTB-210ENST00000477812 MACROD2A1Z1Q3 448 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 TMEM110-MUSTN1A8MSY1 372 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 GGCXP38435 758 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 MLLT6P55198 1093 aaPredicted RBP20.65■□□□□ 0.9
ACTB-210ENST00000477812 TAS2R40P59535 323 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 MANEALQ5VSG8 457 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 RAP1GAP2Q684P5 730 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 RNF43Q68DV7 783 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 SCYL2Q6P3W7 929 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 TMEM25Q86YD3 366 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 DNASE1L2Q92874 299 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 IRF7Q92985 503 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 CHFRQ96EP1 664 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 C1orf74Q96LT6 269 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 SNRNP25Q9BV90 132 aaKnown RBP20.65■□□□□ 0.9
ACTB-210ENST00000477812 MAGEB5Q9BZ81 275 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 OSBPL2Q9H1P3 480 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 SPHK2Q9NRA0 654 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 GTSE1Q9NYZ3 720 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 MARK1Q9P0L2 795 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 PCSK1NQ9UHG2 260 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 SLC12A6Q9UHW9 1150 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 CAPN6Q9Y6Q1 641 aa20.65■□□□□ 0.9
ACTB-210ENST00000477812 KRT86O43790 486 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 PRPSAP2O60256 369 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 MOCS3O95396 460 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 NFATC1O95644 943 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 TACR2P21452 398 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 CHKAP35790 457 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 SGSHP51688 502 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 NRG1Q02297 640 aaPredicted RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 SEMA3BQ13214 749 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 RUNX3Q13761 415 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 AUHQ13825 339 aaKnown RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 DHCR24Q15392 516 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 ARL13BQ3SXY8 428 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 LY6G5CQ5SRR4 150 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 RFWD3Q6PCD5 774 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 SLFN11Q7Z7L1 901 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 C14orf80Q86SX3 495 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 PSTKQ8IV42 348 aaKnown RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 REXO1L1PQ8IX06 675 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 RNF10Q8N5U6 811 aaKnown RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 UHRF1Q96T88 793 aaPredicted RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 IRX2Q9BZI1 471 aaPredicted RBP20.64■□□□□ 0.89
ACTB-210ENST00000477812 ECT2Q9H8V3 914 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 NEU3Q9UQ49 428 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 HYOU1Q9Y4L1 999 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 TICRRQ7Z2Z1 1910 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 MUC3AQ02505 3323 aa20.64■□□□□ 0.89
ACTB-210ENST00000477812 TRDMT1O14717 391 aaKnown RBP20.63■□□□□ 0.89
ACTB-210ENST00000477812 HOXC11O43248 304 aaPredicted RBP20.63■□□□□ 0.89
ACTB-210ENST00000477812 PENKP01210 267 aaPredicted RBP20.63■□□□□ 0.89
ACTB-210ENST00000477812 COMTP21964 271 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 SLC1A1P43005 524 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 CA9Q16790 459 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 C5orf22Q49AR2 442 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 ACBD5Q5T8D3 534 aaPredicted RBP20.63■□□□□ 0.89
ACTB-210ENST00000477812 IER5LQ5T953 404 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 FYB2Q5VWT5 728 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 CHSY1Q86X52 802 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 CPA6Q8N4T0 437 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 TEKT4Q8WW24 435 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 DDX50Q9BQ39 737 aaKnown RBP20.63■□□□□ 0.89
ACTB-210ENST00000477812 LZTFL1Q9NQ48 299 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 GPATCH2LQ9NWQ4 482 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 MUTYHQ9UIF7 546 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 ALG6Q9Y672 507 aa20.63■□□□□ 0.89
ACTB-210ENST00000477812 IGLV3-10A0A075B6K4 115 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 FAM72CH0Y354 149 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 SLC34A2O95436 690 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 RARAP10276 462 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 IRAK1P51617 712 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 ITPRIPL2Q3MIP1 535 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 EFHC2Q5JST6 749 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 ERMARDQ5T6L9 678 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 FAM72AQ5TYM5 149 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 FAM72DQ6L9T8 149 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 FBXL22Q6P050 247 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 FAM72BQ86X60 149 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 PYROXD2Q8N2H3 581 aa20.62■□□□□ 0.89
ACTB-210ENST00000477812 CD101Q93033 1021 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms