RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 GCNT3O95395 438 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 GSTM1P09488 218 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 SFNP31947 248 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 JAK3P52333 1124 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 MAP3K7CLP57077 242 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 HERVK_113Q902F9 699 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 ART4Q93070 314 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 GPRASP2Q96D09 838 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 OR2B2Q9GZK3 357 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 RMND5AQ9H871 391 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 DIABLOQ9NR28 239 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 PKD2L1Q9P0L9 805 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 SENP1Q9P0U3 644 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 TNFRSF10DQ9UBN6 386 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 RIPK3Q9Y572 518 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
RTFDC1-207ENST00000477573 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 B2RBV5 119 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TOMM70O94826 608 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CSTF2P33240 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TTKP33981 857 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 BMXP51813 675 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 ESRRGP62508 458 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NFE2L1Q14494 772 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NEK5Q6P3R8 708 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 GLRX5Q86SX6 157 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 VSIG10LQ86VR7 867 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TICAM1Q8IUC6 712 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 C12orf50Q8NA57 414 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 MAML1Q92585 1016 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 DCUN1D1Q96GG9 259 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 LPIN3Q9BQK8 851 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 SP140LQ9H930 580 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 AP4B1Q9Y6B7 739 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 UBE4BO95155 1302 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TRIM64BA6NI03 449 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 WDR64B1ANS9 1081 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 HOXC11O43248 304 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 BMP10O95393 424 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CRTAMO95727 393 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 FGGP02679 453 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NR3C2P08235 984 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NR2F2P24468 414 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CHRNA3P32297 505 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 BLVRAP53004 296 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NPEPPSP55786 919 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TPTEP56180 551 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 YWHAGP61981 247 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 PHC1P78364 1004 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TBCCQ15814 346 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 GRAMD1BQ3KR37 738 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 RNF111Q6ZNA4 994 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 PRR23CQ6ZRP0 262 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 KCTD20Q7Z5Y7 419 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CHST13Q8NET6 341 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 KBTBD7Q8WVZ9 684 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 TRIB2Q92519 343 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 C12orf43Q96C57 262 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 DOK1Q99704 481 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CDC42EP4Q9H3Q1 356 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 SYTL2Q9HCH5 934 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 NPHS2Q9NP85 383 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 THG1LQ9NWX6 298 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 CEP72Q9P209 647 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 PCYOX1Q9UHG3 505 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 APPL1Q9UKG1 709 aa13.01□□□□□ -0.33
RTFDC1-207ENST00000477573 A0A0A6YYK5 440 aaPredicted RBP13□□□□□ -0.33
RTFDC1-207ENST00000477573 JRKO75564 520 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 LYPLA2O95372 231 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 MAP3K6O95382 1288 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 TGDSO95455 350 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
RTFDC1-207ENST00000477573 RPL21P46778 160 aaKnown RBP13□□□□□ -0.33
RTFDC1-207ENST00000477573 ZBED5Q49AG3 693 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 METTL2BQ6P1Q9 378 aaKnown RBP13□□□□□ -0.33
RTFDC1-207ENST00000477573 RFX8Q6ZV50 586 aa13□□□□□ -0.33
RTFDC1-207ENST00000477573 AMIGO2Q86SJ2 522 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms