RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PTENP60484 403 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 FAM189BP81408 668 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 MBTD1Q05BQ5 628 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 LAMTOR4Q0VGL1 99 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 MXD4Q14582 209 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 FAM187BQ17R55 369 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 ZMAT1Q5H9K5 638 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 UBXN11Q5T124 520 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 RINT1Q6NUQ1 792 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 SHC4Q6S5L8 630 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS45-207ENST00000477558 ARHGEF18Q6ZSZ5 1173 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 HERC6Q8IVU3 1022 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 METTL13Q8N6R0 699 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 SYT2Q8N9I0 419 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 C1orf162Q8NEQ5 155 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 OR14C36Q8NHC7 312 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 PPP1R14CQ8TAE6 165 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 KCNG4Q8TDN1 519 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 TCP11Q8WWU5 503 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 PRPF31Q8WWY3 499 aaKnown RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 TOP1MTQ969P6 601 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 TMEM143Q96AN5 459 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 ZNF689Q96CS4 500 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 EPSTI1Q96J88 318 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 ZNF396Q96N95 335 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 SLC2A13Q96QE2 648 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 FIZ1Q96SL8 496 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 SMAD5Q99717 465 aaKnown RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 TIPINQ9BVW5 301 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 OSBPL6Q9BZF3 934 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 OR10A2Q9H208 303 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 BHMT2Q9H2M3 363 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 MINDY3Q9H8M7 445 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 RGS18Q9NS28 235 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 AGPAT5Q9NUQ2 364 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 SUCLA2Q9P2R7 463 aaPredicted RBP5.73□□□□□ -1.49
VPS45-207ENST00000477558 HPSEQ9Y251 543 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 NR2E1Q9Y466 385 aa5.73□□□□□ -1.49
VPS45-207ENST00000477558 ZMYM2Q9UBW7 1377 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 FRMD3A2A2Y4 597 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 ARHGEF35A5YM69 484 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 GRXCR1A8MXD5 290 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 INPPL1O15357 1258 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 ARHGAP6O43182 974 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA12O60330 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 USO1O60763 962 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 RPS6KA5O75582 802 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 SEC24DO94855 1032 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 ATF7P17544 494 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 HOXA11P31270 313 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 GPR15P49685 360 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 NUCB2P80303 420 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 KARSQ15046 597 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCBP2Q15366 365 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS45-207ENST00000477558 ZFYVE27Q5T4F4 411 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 RESP18Q5W5W9 173 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 TRMT1LQ7Z2T5 733 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 SRGAP1Q7Z6B7 1085 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 CLEC14AQ86T13 490 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 RNF149Q8NC42 400 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PIK3C3Q8NEB9 887 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 TSPEARQ8WU66 669 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 CFHR4Q92496 578 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 LARP4BQ92615 738 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 RAD54LQ92698 747 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 KIFAP3Q92845 792 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 GFM2Q969S9 779 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 FAXDC2Q96IV6 333 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 NTPCRQ9BSD7 190 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 GCOM2Q9BZD3 368 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 POLR3FQ9H1D9 316 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 TTYH1Q9H313 450 aaPredicted RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 FZD8Q9H461 694 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 ELAC1Q9H777 363 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 C17orf75Q9HAS0 396 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 CHST12Q9NRB3 414 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PPP4R1LQ9P1A2 415 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 CFAP45Q9UL16 551 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 ODF2LQ9ULJ1 636 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHA7Q9UN72 937 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 ST3GAL5Q9UNP4 418 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 DNM3Q9UQ16 869 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA9Q9Y5G4 932 aaKnown RBP5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA8Q9Y5G5 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA7Q9Y5G6 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA6Q9Y5G7 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA3Q9Y5H0 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 PCDHGA2Q9Y5H1 932 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 CNTNAP2Q9UHC6 1331 aa5.72□□□□□ -1.49
VPS45-207ENST00000477558 TRIP11Q15643 1979 aa5.71□□□□□ -1.49
VPS45-207ENST00000477558 CITO14578 2027 aa5.71□□□□□ -1.49
VPS45-207ENST00000477558 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.5
VPS45-207ENST00000477558 A0A087WWV3 80 aa5.71□□□□□ -1.5
VPS45-207ENST00000477558 A0A0U1RQF3 1178 aa5.71□□□□□ -1.5
VPS45-207ENST00000477558 DAPK3O43293 454 aa5.71□□□□□ -1.5
VPS45-207ENST00000477558 TSPAN1O60635 241 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms