RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 CACUL1Q86Y37 369 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 C12orf56Q8IXR9 622 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 PDCL2Q8N4E4 241 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 SLC25A18Q9H1K4 315 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 DDX43Q9NXZ2 648 aaKnown RBP10.95□□□□□ -0.66
TRAIP-206ENST00000477546 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 AGAP1Q9UPQ3 857 aa10.95□□□□□ -0.66
TRAIP-206ENST00000477546 NEDD8-MDP1E9PL57 170 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 EFSO43281 561 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 FSBPO95073 299 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 SEMA4FO95754 770 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 ABL1P00519 1130 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 TYRP14679 529 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 TNNI1P19237 187 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 ACAT1P24752 427 aaKnown RBP10.94□□□□□ -0.66
TRAIP-206ENST00000477546 RBMS1P29558 406 aaKnown RBP10.94□□□□□ -0.66
TRAIP-206ENST00000477546 DGKGP49619 791 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 CLN3Q13286 438 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 PSMD6Q15008 389 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 IGFBP7Q16270 282 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 PROX2Q3B8N5 592 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 VSTM1Q6UX27 236 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 USP53Q70EK8 1073 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 WDR49Q8IV35 697 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 CSGALNACT2Q8N6G5 542 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 LRRC52Q8N7C0 313 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 CCDC127Q96BQ5 260 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 SGF29Q96ES7 293 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 SLC46A1Q96NT5 459 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 CGRRF1Q99675 332 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 BBS2Q9BXC9 721 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 KCTD10Q9H3F6 313 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 INTS13Q9NVM9 706 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 THAP10Q9P2Z0 257 aaPredicted RBP10.94□□□□□ -0.66
TRAIP-206ENST00000477546 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
TRAIP-206ENST00000477546 ATXN7L1Q9ULK2 861 aaPredicted RBP10.94□□□□□ -0.66
TRAIP-206ENST00000477546 MAPK8IP1Q9UQF2 711 aa10.94□□□□□ -0.66
TRAIP-206ENST00000477546 PDXKO00764 312 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 CALUO43852 315 aaPredicted RBP10.93□□□□□ -0.66
TRAIP-206ENST00000477546 CSO75390 466 aaKnown RBP10.93□□□□□ -0.66
TRAIP-206ENST00000477546 CLSTN1O94985 981 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 SMC2O95347 1197 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 NR3C1P04150 777 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
TRAIP-206ENST00000477546 RBP5P82980 135 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 DUOXA2Q1HG44 320 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 CEP135Q66GS9 1140 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 C4orf50Q6ZRC1 276 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 SMYD4Q8IYR2 804 aaPredicted RBP10.93□□□□□ -0.66
TRAIP-206ENST00000477546 SLC6A18Q96N87 628 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 BTBD1Q9H0C5 482 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 RMND1Q9NWS8 449 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 MARK1Q9P0L2 795 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 WDR35Q9P2L0 1181 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 SIX4Q9UIU6 781 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 BSNQ9UPA5 3926 aa10.93□□□□□ -0.66
TRAIP-206ENST00000477546 CDRT15L2A8MXV6 281 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 COCHO43405 550 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 OPA1O60313 960 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 HUS1O60921 280 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 WNT1P04628 370 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 CISD3P0C7P0 127 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 C7P10643 843 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 ANXA13P27216 316 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 PCSK1P29120 753 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 RXRGP48443 463 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 CDH8P55286 799 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 TAF10Q12962 218 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 C3orf38Q5JPI3 329 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 TMEM86AQ8N2M4 240 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 GUF1Q8N442 669 aaKnown RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 OXR1Q8N573 874 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 CXorf38Q8TB03 319 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 ZNF564Q8TBZ8 553 aaPredicted RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 ERCC4Q92889 916 aaPredicted RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 SMARCE1Q969G3 411 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 HPDLQ96IR7 371 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 LHX5Q9H2C1 402 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 L1RE1Q9UN81 338 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 SATB2Q9UPW6 733 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 FRMD4BQ9Y2L6 1034 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 PCDHGA8Q9Y5G5 932 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 SNX9Q9Y5X1 595 aa10.92□□□□□ -0.66
TRAIP-206ENST00000477546 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
TRAIP-206ENST00000477546 NUMA1Q14980 2115 aa10.91□□□□□ -0.66
TRAIP-206ENST00000477546 A0A1W2PPC4 97 aa10.91□□□□□ -0.66
TRAIP-206ENST00000477546 LZTS3O60299 673 aaPredicted RBP10.91□□□□□ -0.66
TRAIP-206ENST00000477546 PHACTR2O75167 634 aa10.91□□□□□ -0.66
TRAIP-206ENST00000477546 GADD45BO75293 160 aaPredicted RBP10.91□□□□□ -0.66
TRAIP-206ENST00000477546 GJB6O95452 261 aa10.91□□□□□ -0.66
TRAIP-206ENST00000477546 IGHV4-34P06331 123 aa10.91□□□□□ -0.66
TRAIP-206ENST00000477546 NR2F2P24468 414 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms