RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 DUSP16Q9BY84 665 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC2A11Q9BYW1 496 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 MAGEF1Q9HAY2 307 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 PNPLA8Q9NP80 782 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 AASDHPPTQ9NRN7 309 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 CLIC5Q9NZA1 410 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 STIM2Q9P246 746 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 DKK4Q9UBT3 224 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 FBXO10Q9UK96 956 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 MTMR6Q9Y217 621 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 CEP83Q9Y592 693 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 BPTFQ12830 3046 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 A0A087WV48 116 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 PVALEFA0A1B0GWK0 134 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 MSI1O43347 362 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 TIMM44O43615 452 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 RFPL3O75679 317 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 LDOC1O95751 146 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 IGLV3-19P01714 112 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 PABPC1P11940 636 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 PDIA4P13667 645 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 CD27P26842 260 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 HOXD9P28356 352 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 HLA-FP30511 346 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 TKTL1P51854 596 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 ST8SIA6P61647 398 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 RPS14P62263 151 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 INCA1Q0VD86 236 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 STK4Q13043 487 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 ENPP2Q13822 863 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 SMAD1Q15797 465 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 KCNT1Q5JUK3 1230 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 HES3Q5TGS1 186 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 MBLAC2Q68D91 279 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 KIAA0895LQ68EN5 471 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 PIGZQ86VD9 579 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 TMPRSS12Q86WS5 348 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 DHX40Q8IX18 779 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 AHI1Q8N157 1196 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 SIX6OS1Q8N1H7 587 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 CPXM2Q8N436 756 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 KIAA0895Q8NCT3 520 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 TMC2Q8TDI7 906 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 WFIKKN2Q8TEU8 576 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 BAP1Q92560 729 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 COL26A1Q96A83 441 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 TMA16Q96EY4 203 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 IPO9Q96P70 1041 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 OMDQ99983 421 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 MTG2Q9H4K7 406 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 LRRC4Q9HBW1 653 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 SGK2Q9HBY8 427 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 FBXL12Q9NXK8 326 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 SFMBT1Q9UHJ3 866 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 GGA2Q9UJY4 613 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 FARP1Q9Y4F1 1045 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 CELSR3Q9NYQ7 3312 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
RTFDC1-206ENST00000477485 A0A1W2PP55 124 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 TYW5A2RUC4 315 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 PIK3R2O00459 728 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CAPN9O14815 690 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 PCDHGA12O60330 932 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 DFNA5O60443 496 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 TBL1XO60907 577 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 RNASEH2AO75792 299 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 YEATS4O95619 227 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 ZBED1O96006 694 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 HSP90AA1P07900 732 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CD19P15391 556 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 NR2F2P24468 414 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CD70P32970 193 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 EIF2S3P41091 472 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CTSKP43235 329 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 PSMD8P48556 350 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 NUMBP49757 651 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 SGSHP51688 502 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CXADRP78310 365 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CLDN10P78369 228 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 EHHADHQ08426 723 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 ADIGQ0VDE8 80 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CCDC173Q0VFZ6 552 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 TARDBPQ13148 414 aaKnown RBP eCLIP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CAMK2BQ13554 666 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 PTPRNQ16849 979 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 GOLGA7BQ2TAP0 167 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC45A4Q5BKX6 768 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CNNM4Q6P4Q7 775 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 RFWD3Q6PCD5 774 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 NCEH1Q6PIU2 408 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF605Q86T29 641 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 MFN1Q8IWA4 741 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 FAM186BQ8IYM0 893 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 C1orf216Q8TAB5 229 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms