RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GJB3O75712 270 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 SYPP08247 313 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 ACADMP11310 421 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 ACSL1P33121 698 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
VARS2-208ENST00000477052 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 PTPRNQ16849 979 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
VARS2-208ENST00000477052 WDR45BQ5MNZ6 344 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 ADGRF1Q5T601 910 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 NADSYN1Q6IA69 706 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 SLC35F5Q8WV83 523 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 NT5C1BQ96P26 610 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 ANP32EQ9BTT0 268 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 SLC2A11Q9BYW1 496 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 C6orf106Q9H6K1 298 aaPredicted RBP12.15□□□□□ -0.46
VARS2-208ENST00000477052 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
VARS2-208ENST00000477052 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
VARS2-208ENST00000477052 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
VARS2-208ENST00000477052 CKAP5Q14008 2032 aa12.15□□□□□ -0.47
VARS2-208ENST00000477052 WDFY3Q8IZQ1 3526 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 A0A1B0GVT2 93 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 UPK3BL1B0FP48 263 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 UPK3BL2E5RIL1 263 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 KCNK3O14649 394 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 PSMA7O14818 248 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 GADD45BO75293 160 aaPredicted RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 FYNP06241 537 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 GNSP15586 552 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 CSNK1EP49674 416 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 EIF4HQ15056 248 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 CNGA2Q16280 664 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 MBLAC2Q68D91 279 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 DENND1BQ6P3S1 775 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 METTL3Q86U44 580 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 NAXDQ8IW45 347 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 SCUBE3Q8IX30 993 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 CFAP52Q8N1V2 620 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 OR2T3Q8NH03 318 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 DNASE2BQ8WZ79 361 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 PRICKLE1Q96MT3 831 aaPredicted RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 KREMEN1Q96MU8 473 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 TMEM245Q9H330 911 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 ACP6Q9NPH0 428 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 PRSS16Q9NQE7 514 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 CNGB3Q9NQW8 809 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 XPO7Q9UIA9 1087 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
VARS2-208ENST00000477052 FNDC3AQ9Y2H6 1198 aaKnown RBP12.14□□□□□ -0.47
VARS2-208ENST00000477052 MUC22E2RYF6 1773 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 A0A1B0GTW7 788 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 BCAT2O15382 392 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 IGLV3-27P01718 113 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 LTFP02788 710 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 PAEPP09466 180 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 TBX4P57082 545 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 RPS24P62847 133 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 APBA1Q02410 837 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 TRIP6Q15654 476 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 SYPL2Q5VXT5 272 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 MSANTD2Q6P1R3 559 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 GJB7Q6PEY0 223 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 SETD7Q8WTS6 366 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 DHTKD1Q96HY7 919 aaPredicted RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 NUCKS1Q9H1E3 243 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 LHX5Q9H2C1 402 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 GAREM1Q9H706 876 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
VARS2-208ENST00000477052 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 SUSD2Q9UGT4 822 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 STOML2Q9UJZ1 356 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
VARS2-208ENST00000477052 FAM170AA1A519 330 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
VARS2-208ENST00000477052 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
VARS2-208ENST00000477052 NPC1O15118 1278 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms