RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IGLV3-27P01718 113 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 APOEP02649 317 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 ITGAVP06756 1048 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 PPP3CCP48454 512 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 HCAR3P49019 387 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 ZNF135P52742 658 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-211ENST00000476772 GBE1Q04446 702 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 TMEM121Q9BTD3 319 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 NACA2Q9H009 215 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 C10orf88Q9H8K7 445 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 IL21Q9HBE4 155 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 OBSL1O75147 1896 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 MAP3K6O95382 1288 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 F11P03951 625 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 TUBP50607 506 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 LMNB2Q03252 620 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 SYDE1Q6ZW31 735 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-211ENST00000476772 GSTA5Q7RTV2 222 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 ALLCQ8N6M5 410 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 SLC22A17Q8WUG5 538 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 PRDM16Q9HAZ2 1276 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 NEU2Q9Y3R4 380 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 HS3ST4Q9Y661 456 aa29.81■■■□□ 2.36
VEGFA-211ENST00000476772 DCLK1O15075 740 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 CLASP2O75122 1294 aaKnown RBP29.8■■■□□ 2.36
VEGFA-211ENST00000476772 RBP3P10745 1247 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 SLC10A2Q12908 348 aaPredicted RBP29.8■■■□□ 2.36
VEGFA-211ENST00000476772 PTK6Q13882 451 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 PPM1LQ5SGD2 360 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 KLHDC10Q6PID8 442 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 ZC3H18Q86VM9 953 aaKnown RBP29.8■■■□□ 2.36
VEGFA-211ENST00000476772 MAN1C1Q9NR34 630 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 MSRAQ9UJ68 235 aa29.8■■■□□ 2.36
VEGFA-211ENST00000476772 HBS1LQ9Y450 684 aaKnown RBP29.8■■■□□ 2.36
VEGFA-211ENST00000476772 CHD7Q9P2D1 2997 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 C2orf78A6NCI8 922 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 OAS1P00973 400 aaKnown RBP29.79■■■□□ 2.36
VEGFA-211ENST00000476772 ERCC2P18074 760 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 RING1Q06587 406 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 TRIP13Q15645 432 aaPredicted RBP29.79■■■□□ 2.36
VEGFA-211ENST00000476772 PPP2R2DQ66LE6 453 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 PDE12Q6L8Q7 609 aaKnown RBP29.79■■■□□ 2.36
VEGFA-211ENST00000476772 B4GALNT4Q76KP1 1039 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 TMC8Q8IU68 726 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 HS6ST3Q8IZP7 471 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 ELMOD1Q8N336 334 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 SNX24Q9Y343 169 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 CCL16O15467 120 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 MFSD11O43934 449 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 ERLIN1O75477 346 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 SRGAP2BP0DMP2 458 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 EPHB2P29323 1055 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 KPNA1P52294 538 aaPredicted RBP29.79■■■□□ 2.36
VEGFA-211ENST00000476772 RAB30Q15771 203 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 PIK3R6Q5UE93 754 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 PRUNE1Q86TP1 453 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 ATP6V0D2Q8N8Y2 350 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 LRRC3Q9BY71 257 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 DTLQ9NZJ0 730 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 NFU1Q9UMS0 254 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 NEU3Q9UQ49 428 aa29.79■■■□□ 2.36
VEGFA-211ENST00000476772 EPCAMP16422 314 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 NR2C2P49116 596 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 CUL1Q13616 776 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 MANEALQ5VSG8 457 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 ARNTL2Q8WYA1 636 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 FAM114A2Q9NRY5 505 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 ASIC3Q9UHC3 531 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 SLC12A6Q9UHW9 1150 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 ATG2AQ2TAZ0 1938 aa29.78■■■□□ 2.36
VEGFA-211ENST00000476772 CHD9Q3L8U1 2897 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 H7C0C1 242 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 SGK1O00141 431 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 KRT14P02533 472 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 GABRR2P28476 465 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 RPL21P46778 160 aaKnown RBP29.77■■■□□ 2.36
VEGFA-211ENST00000476772 ATP5OP48047 213 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 KCNQ1P51787 676 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 PAFAH1B3Q15102 231 aaKnown RBP29.77■■■□□ 2.36
VEGFA-211ENST00000476772 PABPC1LQ4VXU2 614 aaKnown RBP29.77■■■□□ 2.36
VEGFA-211ENST00000476772 ARTNQ5T4W7 220 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 DARS2Q6PI48 645 aaKnown RBP29.77■■■□□ 2.36
VEGFA-211ENST00000476772 CCDC33Q8N5R6 958 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 GLIS1Q8NBF1 620 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 HNRNPLLQ8WVV9 542 aaKnown RBP29.77■■■□□ 2.36
VEGFA-211ENST00000476772 BTN2A3PQ96KV6 586 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 RNF38Q9H0F5 515 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 MYO7AQ13402 2215 aa29.77■■■□□ 2.36
VEGFA-211ENST00000476772 PER2O15055 1255 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 SEC31AO94979 1220 aaKnown RBP29.76■■■□□ 2.36
VEGFA-211ENST00000476772 RANBP2P49792 3224 aaKnown RBP29.76■■■□□ 2.36
VEGFA-211ENST00000476772 GDF10P55107 478 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 MLLT6P55198 1093 aaPredicted RBP29.76■■■□□ 2.36
VEGFA-211ENST00000476772 NRG1Q02297 640 aaPredicted RBP29.76■■■□□ 2.36
VEGFA-211ENST00000476772 MS4A13Q5J8X5 152 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 TMCO3Q6UWJ1 677 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 GAREM2Q75VX8 874 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 C14orf80Q86SX3 495 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 UNC45BQ8IWX7 931 aa29.76■■■□□ 2.36
VEGFA-211ENST00000476772 C1orf74Q96LT6 269 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms