RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRIP4Q15650 581 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-219ENST00000476625 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
HDAC6-219ENST00000476625 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 IL27RAQ6UWB1 636 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 UBA3Q8TBC4 463 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 MYO19Q96H55 970 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 ZNF396Q96N95 335 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-219ENST00000476625 CDC6Q99741 560 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 GGA2Q9UJY4 613 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 ZNF510Q9Y2H8 683 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 APC2O95996 2303 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 A0A087WV48 116 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 E7ENQ6 273 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 NR2F2P24468 414 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 EIF2S3P41091 472 aaKnown RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 CTSOP43234 321 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 GRIA4P48058 902 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 PSEN1P49768 467 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 SEMG2Q02383 582 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 PDE4CQ08493 712 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 ADIGQ0VDE8 80 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 ZNF276Q8N554 614 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 GOLGA5Q8TBA6 731 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 CLEC4CQ8WTT0 213 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 PRICKLE1Q96MT3 831 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-219ENST00000476625 DCLK3Q9C098 648 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 STIM2Q9P246 746 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 DKK4Q9UBT3 224 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
HDAC6-219ENST00000476625 A0A1W2PP55 124 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 PDXKO00764 312 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 IKBKBO14920 756 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 NPC1O15118 1278 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 MID1O15344 667 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 TBL1XO60907 577 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 SIN3BO75182 1162 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 DNTTP04053 509 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 PABPC1P11940 636 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 PFKFB1P16118 471 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 CD27P26842 260 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 GRK6P43250 576 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 ABCG1P45844 678 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 ZNF132P52740 706 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 METAP1P53582 386 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 DNM1Q05193 864 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 TEAD4Q15561 434 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 MPPE1Q53F39 396 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 KIAA0895LQ68EN5 471 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 NADSYN1Q6IA69 706 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 ADAT2Q7Z6V5 191 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 KIAA0907Q7Z7F0 614 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 FAM186BQ8IYM0 893 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 SMYD4Q8IYR2 804 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 GALNT15Q8N3T1 639 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 TMEM176AQ96HP8 235 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 INTS6Q9UL03 887 aaKnown RBP12.48□□□□□ -0.41
HDAC6-219ENST00000476625 STRIP2Q9ULQ0 834 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
HDAC6-219ENST00000476625 GOLGA4Q13439 2230 aaKnown RBP12.47□□□□□ -0.41
HDAC6-219ENST00000476625 A0A1B0GTQ1 180 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 ENC1O14682 589 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 ZBED1O96006 694 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 F13A1P00488 732 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 SLFN14P0C7P3 912 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 LCP1P13796 627 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 RGS7P49802 495 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 BNIP3Q12983 259 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 TARDBPQ13148 414 aaKnown RBP eCLIP12.47□□□□□ -0.412e-7■■□□□ 13.5
HDAC6-219ENST00000476625 FAM133BQ5BKY9 247 aaKnown RBP12.47□□□□□ -0.41
HDAC6-219ENST00000476625 SCUBE3Q8IX30 993 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
HDAC6-219ENST00000476625 GANCQ8TET4 914 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 CNDP2Q96KP4 475 aaKnown RBP12.47□□□□□ -0.41
HDAC6-219ENST00000476625 LMLNQ96KR4 655 aa12.47□□□□□ -0.41
HDAC6-219ENST00000476625 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms