RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MTG1Q9BT17 334 aaPredicted RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 NUMBLQ9Y6R0 609 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SPAG6O75602 509 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 UNC5CO95185 931 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 BSPRYQ5W0U4 402 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 KCNV2Q8TDN2 545 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 EBNA1BP2Q99848 306 aaKnown RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 KCNK1O00180 336 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 TM9SF1O15321 606 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 MGEA5O60502 916 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 PRKCHP24723 683 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 ETV4P43268 484 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 OLIG2Q13516 323 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 FAM35AQ86V20 835 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SLC2A13Q96QE2 648 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 FRMD8Q9BZ67 464 aaPredicted RBP17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 MANSC1Q9H8J5 431 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 ZFYVE28Q9HCC9 887 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SLC38A7Q9NVC3 462 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 SLC17A6Q9P2U8 582 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 STAP1Q9ULZ2 295 aa17.16■□□□□ 0.34
TVP23B-202ENST00000476139 A0A0A0MRY4 1105 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 WDR27A2RRH5 827 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 RNF103O00237 685 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 NEFHP12036 1026 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 CD52P31358 61 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 SEMA5AQ13591 1074 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 RFX8Q6ZV50 586 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 ALKBH8Q96BT7 664 aaKnown RBP17.15■□□□□ 0.34
TVP23B-202ENST00000476139 SPATA13Q96N96 652 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 PLCD4Q9BRC7 762 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 USH1CQ9Y6N9 552 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 HMX2A2RU54 273 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 C2orf71A6NGG8 1288 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 CDC25CP30307 473 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 ADRA1BP35368 520 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 THPOP40225 353 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 GJA9P57773 515 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 DAOAP59103 153 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 SLC18A2Q05940 514 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 CBLBQ13191 982 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 UPP1Q16831 310 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 MROH9Q5TGP6 573 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 TTC39BQ5VTQ0 682 aaPredicted RBP17.15■□□□□ 0.34
TVP23B-202ENST00000476139 CASC4Q6P4E1 433 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 RFWD2Q8NHY2 731 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 WDR6Q9NNW5 1121 aaKnown RBP17.15■□□□□ 0.34
TVP23B-202ENST00000476139 SNX10Q9Y5X0 201 aa17.15■□□□□ 0.34
TVP23B-202ENST00000476139 A0A0G2JND7 137 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 EEF2KO00418 725 aaKnown RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 B3GAT3O94766 335 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 CYBAP13498 195 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 TPSB2P20231 275 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 LHX1P48742 406 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 NEK3P51956 506 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 SESN2P58004 480 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 TPSAB1Q15661 275 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 TAF1BQ53T94 588 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 MTDHQ86UE4 582 aaKnown RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 SERINC5Q86VE9 423 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 OXNAD1Q96HP4 312 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 APOPT1Q96IL0 206 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 VPS11Q9H270 941 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 IL1RAPL1Q9NZN1 696 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 PADI3Q9ULW8 664 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 ZNF638Q14966 1978 aaKnown RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 F8W810 466 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 TRDMT1O14717 391 aaKnown RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 DIAPH2O60879 1101 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 BRCC3P46736 316 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 WASHC5Q12768 1159 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 SRPK1Q96SB4 655 aaKnown RBP17.14■□□□□ 0.33
TVP23B-202ENST00000476139 RTP3Q9BQQ7 232 aa17.14■□□□□ 0.33
TVP23B-202ENST00000476139 H3BRJ5 948 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 RFPL1O75677 317 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 TOP3BO95985 862 aaKnown RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 PSMB4P28070 264 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 DPYSQ14117 519 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 ZNF567Q8N184 647 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 GSDMBQ8TAX9 411 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 C10orf82Q8WW14 230 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 LRRC39Q96DD0 335 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 MECRQ9BV79 373 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 DDIT4Q9NX09 232 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 RCOR3Q9P2K3 495 aaPredicted RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 HHLA1C9JL84 531 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 T-ENOLP0DO92 83 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 ERCC2P18074 760 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms