RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 CPXM2Q8N436 756 aa21.18■□□□□ 0.98
HDAC11-217ENST00000475818 DCBLD1Q8N8Z6 715 aa21.18■□□□□ 0.98
HDAC11-217ENST00000475818 FBRSQ9HAH7 460 aa21.18■□□□□ 0.98
HDAC11-217ENST00000475818 SERGEFQ9UGK8 458 aa21.18■□□□□ 0.98
HDAC11-217ENST00000475818 PCDHB1Q9Y5F3 818 aa21.18■□□□□ 0.98
HDAC11-217ENST00000475818 SLC12A8A0AV02 714 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 YKT6O15498 198 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 VNN1O95497 513 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 C7P10643 843 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 HOXD9P28356 352 aaPredicted RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 CD38P28907 300 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 ARRB1P49407 418 aaPredicted RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 PSEN1P49768 467 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 KIF11P52732 1056 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 GALCP54803 685 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 ILKQ13418 452 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 CCDC186Q7Z3E2 898 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 ZC3H3Q8IXZ2 948 aaKnown RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 HNRNPABQ99729 332 aaKnown RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 PABPC3Q9H361 631 aaKnown RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 ABCB8Q9NUT2 735 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 FBXL12Q9NXK8 326 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 SRPRBQ9Y5M8 271 aaKnown RBP21.17■□□□□ 0.98
HDAC11-217ENST00000475818 ATMQ13315 3056 aa21.17■□□□□ 0.98
HDAC11-217ENST00000475818 TP53BP1Q12888 1972 aaPredicted RBP21.16■□□□□ 0.98
HDAC11-217ENST00000475818 A0A1W2PR77 199 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 EIF3DO15371 548 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC11-217ENST00000475818 MT-CO3P00414 261 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 UCNP55089 124 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 ADIPOR2Q86V24 386 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 PDILTQ8N807 584 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 ZNF507Q8TCN5 953 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 WFIKKN2Q8TEU8 576 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 RFFLQ8WZ73 363 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 TTC9Q92623 222 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 GOLGA1Q92805 767 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 TWNKQ96RR1 684 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 CDK5RAP1Q96SZ6 601 aaKnown RBP21.16■□□□□ 0.98
HDAC11-217ENST00000475818 CLIC5Q9NZA1 410 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 MARCH2Q9P0N8 246 aa21.16■□□□□ 0.98
HDAC11-217ENST00000475818 LRRIQ3A6PVS8 624 aaPredicted RBP21.15■□□□□ 0.98
HDAC11-217ENST00000475818 MPOP05164 745 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 P4HA1P13674 534 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 MPPE1Q53F39 396 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 SFMBT2Q5VUG0 894 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 MBLAC2Q68D91 279 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 SPOPLQ6IQ16 392 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 RSRC2Q7L4I2 434 aaKnown RBP21.15■□□□□ 0.98
HDAC11-217ENST00000475818 EPM2AIP1Q7L775 607 aaPredicted RBP21.15■□□□□ 0.98
HDAC11-217ENST00000475818 UNC93AQ86WB7 457 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 DHX40Q8IX18 779 aaKnown RBP21.15■□□□□ 0.98
HDAC11-217ENST00000475818 CACTIN-AS1Q8N1I8 211 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 ZNF276Q8N554 614 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 CYFIP2Q96F07 1278 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 HIC2Q96JB3 615 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 ADAMTS1Q9UHI8 967 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 GGA2Q9UJY4 613 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 STRIP2Q9ULQ0 834 aa21.15■□□□□ 0.98
HDAC11-217ENST00000475818 A0A1W2PP55 124 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 KLK10O43240 276 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 C4BPAP04003 597 aaKnown RBP21.14■□□□□ 0.97
HDAC11-217ENST00000475818 NXPH1P58417 271 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 CEBPZQ03701 1054 aaKnown RBP21.14■□□□□ 0.97
HDAC11-217ENST00000475818 KCNJ12Q14500 433 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 USP30Q70CQ3 517 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 PRICKLE2Q7Z3G6 844 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 FAM217AQ8IXS0 508 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 KCNE4Q8WWG9 221 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 TMX3Q96JJ7 454 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 SERAC1Q96JX3 654 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 ZNF578Q96N58 590 aaPredicted RBP21.14■□□□□ 0.97
HDAC11-217ENST00000475818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.14■□□□□ 0.97
HDAC11-217ENST00000475818 RSPH9Q9H1X1 276 aaPredicted RBP21.14■□□□□ 0.97
HDAC11-217ENST00000475818 NEUROG2Q9H2A3 272 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 PNPLA8Q9NP80 782 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 SMC3Q9UQE7 1217 aa21.14■□□□□ 0.97
HDAC11-217ENST00000475818 LRRC72A6NJI9 287 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 TLR4O00206 839 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 STX6O43752 255 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 EXOC3O60645 756 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 RNASEH2AO75792 299 aaKnown RBP21.13■□□□□ 0.97
HDAC11-217ENST00000475818 DLDP09622 509 aaKnown RBP21.13■□□□□ 0.97
HDAC11-217ENST00000475818 PABPC1P11940 636 aaKnown RBP21.13■□□□□ 0.97
HDAC11-217ENST00000475818 ASPAP45381 313 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 EHHADHQ08426 723 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 FAM26FQ5R3K3 315 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 KANSL1Q7Z3B3 1105 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 AHI1Q8N157 1196 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 TRIM4Q9C037 500 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 SUN2Q9UH99 717 aa21.13■□□□□ 0.97
HDAC11-217ENST00000475818 MID1O15344 667 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 SDC3O75056 442 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 TRIM21P19474 475 aaKnown RBP21.12■□□□□ 0.97
HDAC11-217ENST00000475818 ACP1P24666 158 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 GABREP78334 506 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 ASIC1P78348 528 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 PROX2Q3B8N5 592 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 OR2T34Q8NGX1 318 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 MED8Q96G25 268 aa21.12■□□□□ 0.97
HDAC11-217ENST00000475818 USP3Q9Y6I4 520 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms