RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 ASLP04424 464 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
TTC38-206ENST00000475467 C1SP09871 688 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 MXI1P50539 228 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 SGO2Q562F6 1265 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 NUGGCQ68CJ6 796 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 PDZD3Q86UT5 571 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 SLC4A11Q8NBS3 891 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
TTC38-206ENST00000475467 CD93Q9NPY3 652 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 ANKRD6Q9Y2G4 727 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
TTC38-206ENST00000475467 DMXL2Q8TDJ6 3036 aa12.9□□□□□ -0.34
TTC38-206ENST00000475467 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 CETN3O15182 167 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 TSPAN3O60637 253 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 HMBSP08397 361 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 PFKFB1P16118 471 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 POLR2EP19388 210 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 PRKCHP24723 683 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 HOXD9P28356 352 aaPredicted RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 SYKP43405 635 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 SLC11A2P49281 568 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 RAD23BP54727 409 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 ST8SIA6P61647 398 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 STILQ15468 1287 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 FNDC3BQ53EP0 1204 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 ZNF394Q53GI3 561 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 CHST9Q7L1S5 443 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 PNPLA1Q8N8W4 532 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 IRGQQ8WZA9 623 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 PLXNB3Q9ULL4 1909 aa12.89□□□□□ -0.35
TTC38-206ENST00000475467 GOLGA4Q13439 2230 aaKnown RBP12.89□□□□□ -0.35
TTC38-206ENST00000475467 SPEGQ15772 3267 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 APC2O95996 2303 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 A0A1B0GVT2 93 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 VDRP11473 427 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 PABPC1P11940 636 aaKnown RBP12.88□□□□□ -0.35
TTC38-206ENST00000475467 HLA-FP30511 346 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
TTC38-206ENST00000475467 KRT85P78386 507 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 KIF19Q2TAC6 998 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 ZNF776Q68DI1 518 aaPredicted RBP12.88□□□□□ -0.35
TTC38-206ENST00000475467 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
TTC38-206ENST00000475467 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 SNX19Q92543 992 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 ARID3AQ99856 593 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
TTC38-206ENST00000475467 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TOR4AQ9NXH8 423 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 GGA2Q9UJY4 613 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 TSPAN16Q9UKR8 245 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 PTPRBP23467 1997 aa12.88□□□□□ -0.35
TTC38-206ENST00000475467 A0A087WV48 116 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
TTC38-206ENST00000475467 EIF4E1BA6NMX2 242 aaKnown RBP12.87□□□□□ -0.35
TTC38-206ENST00000475467 VILLO15195 856 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
TTC38-206ENST00000475467 ACSL1P33121 698 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 HNF1BP35680 557 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 NUDT1P36639 197 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 CTSKP43235 329 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 C21orf59P57076 290 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
TTC38-206ENST00000475467 BNC1Q01954 994 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
TTC38-206ENST00000475467 DPYDQ12882 1025 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 NNTQ13423 1086 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 PTPRNQ16849 979 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 ZCWPW2Q504Y3 356 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 MBLAC2Q68D91 279 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 MSANTD2Q6P1R3 559 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 OXR1Q8N573 874 aa12.87□□□□□ -0.35
TTC38-206ENST00000475467 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms