RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 AHCYL2Q96HN2 611 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 TMEM79Q9BSE2 394 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ATP13A1Q9HD20 1204 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 RGS18Q9NS28 235 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CCDC167Q9P0B6 97 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 VIL1P09327 827 aaKnown RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 SP100P23497 879 aaPredicted RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 FMO4P31512 558 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 SLC26A2P50443 739 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 NFE2Q16621 373 aaPredicted RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 MID1IP1Q9NPA3 183 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 IL17RBQ9NRM6 502 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 ZSCAN5CA6NGD5 496 aaPredicted RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 LSM8O95777 96 aaKnown RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 TRIM25Q14258 630 aaKnown RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 ITIH4Q14624 930 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 TLK2Q86UE8 772 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 DNERQ8NFT8 737 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 GLIS2Q9BZE0 524 aaPredicted RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 ZFYVE1Q9HBF4 777 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 BATF3Q9NR55 127 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 PPIEQ9UNP9 301 aaKnown RBP11.21□□□□□ -0.61
VAPB-204ENST00000475243 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 VAPBO95292 243 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 TMEM159Q96B96 161 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 SMARCD1Q96GM5 515 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 DPY30Q9C005 99 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 TKTL2Q9H0I9 626 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 RAD54BQ9Y620 910 aa11.21□□□□□ -0.61
VAPB-204ENST00000475243 CCDC154A6NI56 674 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 KPNA3O00505 521 aaPredicted RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 CALB2P22676 271 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 GTF2E2P29084 291 aaKnown RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 ELOA2Q8IYF1 753 aaPredicted RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 REPS2Q8NFH8 660 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 STMN3Q9NZ72 180 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 SEC22BO75396 215 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 UBOX5O94941 541 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 PSMA3P25788 255 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 RARRES1P49788 294 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 ATP12AP54707 1039 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 ZBTB49Q6ZSB9 765 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 FAM228AQ86W67 206 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 SLC22A9Q8IVM8 553 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 UBDO15205 165 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 CYP2A7P20853 494 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 CNTFP26441 200 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 CD151P48509 253 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 ALDH5A1P51649 535 aaPredicted RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 CCDC92Q53HC0 331 aaPredicted RBP11.21□□□□□ -0.62
VAPB-204ENST00000475243 TBCELQ5QJ74 424 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 ZCCHC23Q6ZST2 131 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 KRT77Q7Z794 578 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 COMMD8Q9NX08 183 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 FAM50BQ9Y247 325 aa11.21□□□□□ -0.62
VAPB-204ENST00000475243 SLITRK3O94933 977 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MGAT5Q09328 741 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 DGKKQ5KSL6 1271 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MOXD1Q6UVY6 613 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 HDDC2Q7Z4H3 204 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 SH3GL1Q99961 368 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 HDHD2Q9H0R4 259 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 KANSL3Q9P2N6 904 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 PRKAG3Q9UGI9 489 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 SNTNA6NMZ2 147 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TCP10LQ8TDR4 215 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 THG1LQ9NWX6 298 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 PEX1O43933 1283 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MPOP05164 745 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 RENBPP51606 427 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MACC1Q6ZN28 852 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 DMGDHQ9UI17 866 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 ZNF112Q9UJU3 913 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 RAD51BO15315 384 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 PPP2R1BP30154 601 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 HSPA13P48723 471 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TGM3Q08188 693 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 SEC23AQ15436 765 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 OASLQ15646 514 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 ZNF470Q6ECI4 717 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TAF2Q6P1X5 1199 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms