RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 CCDC25Q86WR0 208 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 TTC9BQ8N6N2 239 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 FAM71DQ8N9W8 422 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 GLIS1Q8NBF1 620 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 ATXN2LQ8WWM7 1075 aaKnown RBP10.56□□□□□ -0.72
PCCB-213ENST00000475214 FBXO32Q969P5 355 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 MAGEB5Q9BZ81 275 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 OSBPL2Q9H1P3 480 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 PABPC3Q9H361 631 aaKnown RBP10.56□□□□□ -0.72
PCCB-213ENST00000475214 NMUR1Q9HB89 426 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
PCCB-213ENST00000475214 ARHGEF4Q9NR80 690 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 ARHGEF38Q9NXL2 777 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 PAK5Q9P286 719 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 STK39Q9UEW8 545 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
PCCB-213ENST00000475214 PLXNA3P51805 1871 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 CDH23Q9H251 3354 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 WDR27A2RRH5 827 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 C2CD2LO14523 706 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 PPP1R12AO14974 1030 aaPredicted RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 URODP06132 367 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 SLC2A3P11169 496 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 RBL1P28749 1068 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 HTR7P34969 479 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 USP46P62068 366 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 DSG1Q02413 1049 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 GBE1Q04446 702 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 SEMA3BQ13214 749 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 DPYSQ14117 519 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 CEP85LQ5SZL2 805 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 RNASEH2BQ5TBB1 312 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 TPGS2Q68CL5 300 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 MSANTD2Q6P1R3 559 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 TMCO2Q7Z6W1 182 aaPredicted RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 CROCCP2Q86T23 111 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 DDX53Q86TM3 631 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 HOOK3Q86VS8 718 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 HERC6Q8IVU3 1022 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 PPIL6Q8IXY8 311 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 ZCCHC9Q8N567 271 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 TFB1MQ8WVM0 346 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 CASP10Q92851 521 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 RTP4Q96DX8 246 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 HAPLN3Q96S86 360 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 VN1R3Q9BXE9 311 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 C10orf88Q9H8K7 445 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 TMPRSS4Q9NRS4 437 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 GMIPQ9P107 970 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 AFF4Q9UHB7 1163 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 SHOC2Q9UQ13 582 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 YBX2Q9Y2T7 364 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
PCCB-213ENST00000475214 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
PCCB-213ENST00000475214 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 DCLK1O15075 740 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 POLR3GO15318 223 aaPredicted RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 TP73O15350 636 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 NCAM2O15394 837 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 ADAM12O43184 909 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 TLL1O43897 1013 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 RNF40O75150 1001 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 SOAT2O75908 522 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 STK10O94804 968 aaKnown RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 VNN2O95498 520 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 CA3P07451 260 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 NUDT17P0C025 328 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 ERCC2P18074 760 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 SERPINB6P35237 376 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 CHKAP35790 457 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 TBX4P57082 545 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 CREMQ03060 361 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 TAF10Q12962 218 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 PDK1Q15118 436 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 AAK1Q2M2I8 961 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 HEATR6Q6AI08 1181 aaKnown RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 CENPUQ71F23 418 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 B4GALNT4Q76KP1 1039 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 TADA2BQ86TJ2 420 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 RELL1Q8IUW5 271 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 FIBCD1Q8N539 461 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 STKLD1Q8NE28 680 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 PDZD8Q8NEN9 1154 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 ZNF461Q8TAF7 563 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms