RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SFMBT1Q9UHJ3 866 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 SLCO1B1Q9Y6L6 691 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 CABIN1Q9Y6J0 2220 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 DSPP15924 2871 aaKnown RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 ANKRD11Q6UB99 2663 aaPredicted RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 PTPRBP23467 1997 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 GOLGA8CPA6NN73 597 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 HLA-FP30511 346 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 MXI1P50539 228 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 AFF3P51826 1226 aaKnown RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 PDE4CQ08493 712 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 SUZ12Q15022 739 aaKnown RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 ACAP1Q15027 740 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 KIF19Q2TAC6 998 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 BSPRYQ5W0U4 402 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 CHST9Q7L1S5 443 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 ZNF366Q8N895 744 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 MDM1Q8TC05 714 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 RNF139Q8WU17 664 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 EDEM1Q92611 657 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 CDC6Q99741 560 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 TMEM245Q9H330 911 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 LRRC4Q9HBW1 653 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 ABCB8Q9NUT2 735 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 HBS1LQ9Y450 684 aaKnown RBP16.3■□□□□ 0.2
SRRT-209ENST00000474896 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
SRRT-209ENST00000474896 KCNK3O14649 394 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
SRRT-209ENST00000474896 FLRT2O43155 660 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 STX10O60499 249 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 ZCWPW2Q504Y3 356 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 ADGRF1Q5T601 910 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 TMPRSS7Q7RTY8 843 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 ADIPOR2Q86V24 386 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 BAHD1Q8TBE0 780 aaPredicted RBP16.29■□□□□ 0.2
SRRT-209ENST00000474896 GPT2Q8TD30 523 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 WFIKKN2Q8TEU8 576 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 TOR4AQ9NXH8 423 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 STOML2Q9UJZ1 356 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 ANKRD6Q9Y2G4 727 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 SNX11Q9Y5W9 270 aa16.29■□□□□ 0.2
SRRT-209ENST00000474896 YJEFN3A6XGL0 299 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 E7ENQ6 273 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 MBD3O95983 291 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 BCAT1P54687 386 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 RPS14P62263 151 aaKnown RBP16.28■□□□□ 0.2
SRRT-209ENST00000474896 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 TEAD4Q15561 434 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 PTPRNQ16849 979 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 COL28A1Q2UY09 1125 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 SGO2Q562F6 1265 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 MBLAC2Q68D91 279 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 KIAA0907Q7Z7F0 614 aaPredicted RBP16.28■□□□□ 0.2
SRRT-209ENST00000474896 MARCH9Q86YJ5 346 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 HNRNPLLQ8WVV9 542 aaKnown RBP16.28■□□□□ 0.2
SRRT-209ENST00000474896 BIRC7Q96CA5 298 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 BTBD1Q9H0C5 482 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 TM9SF3Q9HD45 589 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 PRSS16Q9NQE7 514 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 GGA2Q9UJY4 613 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.28■□□□□ 0.2
SRRT-209ENST00000474896 BTBD3Q9Y2F9 522 aa16.28■□□□□ 0.2
SRRT-209ENST00000474896 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.28■□□□□ 0.2
SRRT-209ENST00000474896 GOLGA4Q13439 2230 aaKnown RBP16.28■□□□□ 0.2
SRRT-209ENST00000474896 FASNP49327 2511 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 CETN3O15182 167 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 MSI1O43347 362 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 FSBPO95073 299 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 SEMA4FO95754 770 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 PABPC1P11940 636 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 CD19P15391 556 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 PTMSP20962 102 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 SGSHP51688 502 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 ZNF445P59923 1031 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 PDZD3Q86UT5 571 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 ZC3H3Q8IXZ2 948 aaKnown RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 SMYD4Q8IYR2 804 aaPredicted RBP16.27■□□□□ 0.2
SRRT-209ENST00000474896 AHI1Q8N157 1196 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.27■□□□□ 0.2
SRRT-209ENST00000474896 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 ABCC13Q9NSE7 274 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 SUN2Q9UH99 717 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 RAXQ9Y2V3 346 aa16.27■□□□□ 0.2
SRRT-209ENST00000474896 ACACAQ13085 2346 aa16.27■□□□□ 0.19
SRRT-209ENST00000474896 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
SRRT-209ENST00000474896 DKK1O94907 266 aa16.26■□□□□ 0.19
SRRT-209ENST00000474896 LATS1O95835 1130 aa16.26■□□□□ 0.19
SRRT-209ENST00000474896 DNTTP04053 509 aa16.26■□□□□ 0.19
SRRT-209ENST00000474896 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
SRRT-209ENST00000474896 DLDP09622 509 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms